activity
20232026
most citedTowards contrast-agnostic soft segmentation of the spinal cord

30 citations · 50 across the 8 of their papers we have counts for

collaborators

9 papers

cs.CV2026

Lessons learned from deploying imaging AI with the open PACS-AI platform

Samuel Kadoury, Julie G. Hussin, Pascal Thériault-Lauzier +11

We describe deploying imaging AI at six hospitals through PACS-AI, an open self-hosted platform. The binding constraint is not model accuracy but infrastructure to route studies, d…

cs.CV2026

One Sequence to Segment Them All: Efficient Data Augmentation for CT and MRI Cross-Domain 3D Spine Segmentation

Nathan Molinier, Hendrik Möller, Thomas Dagonneau +6

Deep learning-based medical image segmentation is increasingly used to support clinical diagnosis and develop new treatment strategies. However, model performance remains limited b…

q-bio.TO2025★ 1 cited

Segmentation of spinal rootlets across MRI contrasts with RootletSeg

Katerina Krejci, Jiri Chmelik, Sandrine Bedard +5

Purpose: To develop a deep learning method for the automatic segmentation of spinal nerve rootlets on various MRI scans. Material and Methods: This retrospective study included MRI…

eess.IV2025

Rootlets-based registration to the spinal cord PAM50 template

Sandrine Bédard, Jan Valošek, Valeria Oliva +2

Spinal cord functional MRI studies require precise localization of spinal levels for reliable voxelwise group analyses. Traditional template-based registration of the spinal cord u…

physics.med-ph2024

Considerations and recommendations from the ISMRM Diffusion Study Group for preclinical diffusion MRI: Part 3 -- Ex vivo imaging: data processing, comparisons with microscopy, and tractography

Kurt G Schilling, Amy FD Howard, Francesco Grussu +55

Preclinical diffusion MRI (dMRI) has proven value in methods development and validation, characterizing the biological basis of diffusion phenomena, and comparative anatomy. While…

cs.CV2024★ 3 cited

SCIsegV2: A Universal Tool for Segmentation of Intramedullary Lesions in Spinal Cord Injury

Enamundram Naga Karthik, Jan Valošek, Lynn Farner +10

Spinal cord injury (SCI) is a devastating incidence leading to permanent paralysis and loss of sensory-motor functions potentially resulting in the formation of lesions within the…

cs.CY2024

Open Source in Lab Management

Julien Cohen-Adad

This document explores the advantages of integrating open source software and practices in managing a scientific lab, emphasizing reproducibility and the avoidance of pitfalls. It…

cs.CV2024★ 16 cited

Automatic Segmentation of the Spinal Cord Nerve Rootlets

Jan Valosek, Theo Mathieu, Raphaelle Schlienger +2

Precise identification of spinal nerve rootlets is relevant to delineate spinal levels for the study of functional activity in the spinal cord. The goal of this study was to develo…

eess.IV2023★ 30 cited

Towards contrast-agnostic soft segmentation of the spinal cord

Sandrine Bédard, Enamundram Naga Karthik, Charidimos Tsagkas +5

Spinal cord segmentation is clinically relevant and is notably used to compute spinal cord cross-sectional area (CSA) for the diagnosis and monitoring of cord compression or neurod…