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20082026
most citedRelationship between promoter sequence and its strength in gene expression

46 citations · 238 across the 59 of their papers we have counts for

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23 papers · 1 filter

physics.bio-ph2026

Optimal transition in underdamped systems with memory

Tianyu Luo, Yunxin Zhang

Optimal finite-time control is essential for energy-efficient operation of nanoscale devices. While existing work has largely focused on transitions between equilibrium states in o…

physics.bio-ph2025

Asymptotics of Protein Number Distribution in Stochastic Gene Expression Models under Burst Approximation

Yuntao Lu, Yunxin Zhang

The burst approximation is a widely used technique to simplify stochastic gene expression models. However, the dynamics and analytical properties of the protein number distribution…

physics.bio-ph2025

Approximation Error of the Burst Approximation for a Stochastic Gene Expression Model

Yuntao Lu, Yunxin Zhang

Stochastic modeling of gene expression is a classic problem in theoretical biophysics, and the burst approximation is widely used to simplify gene expression models formulated via…

physics.bio-ph2025★ 1 cited

Stochastic Kinetics of mRNA Molecules in a General Transcription Model

Yuntao Lu, Yunxin Zhang

Stochastic modeling of transcription is a classic yet long-standing problem in theoretical biophysics. The lack of unified results and a computationally efficient approach for a ge…

physics.bio-ph2024

Factors influencing the stability of the motor-clutch model on compliant substrates under external load

Beibei Shen, Yunxin Zhang

Cellular migration is crucial for biological processes including embryonic development, immune response, and wound healing. The myosin-clutch model is a framework that describes ho…

physics.bio-ph2023

Cooperation of myosin II in muscle contraction through nonlinear elasticity

Beibei Shen, Yunxin Zhang

Myosin II plays a pivotal role in muscle contraction by generating force through the cooperative action of multiple motors on actin filaments. In this study, we integrate the nonli…