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20242026
most citedImproving Protein Sequence Design through Designability Preference Optimization

2 citations · 2 across the 8 of their papers we have counts for

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5 papers · 1 filter

cs.LG2026

LEAD: Length-Efficient Adaptive and Dynamic Reasoning for Large Language Models

Songtao Wei, Yi Li, Zhikai Li +7

Large reasoning models, such as OpenAI o1 and DeepSeek-R1, tend to become increasingly verbose as their reasoning capabilities improve. These inflated Chain-of-Thought (CoT) trajec…

cs.LG2026

LLM-Guided Dynamic Action Spaces for Synthesizable Molecular Optimization

Tao Li, Kaiyuan Hou, Tuan Vinh +4

Synthesizable molecular optimization seeks to improve target properties while ensuring that molecular modifications follow feasible synthetic pathways. Existing synthesis-aware met…

cs.LG2026

CoSA: Compressed Sensing-Based Adaptation of Large Language Models

Songtao Wei, Yi Li, Bohan Zhang +6

Parameter-Efficient Fine-Tuning (PEFT) has emerged as a practical paradigm for adapting large language models (LLMs) without updating all parameters. Most existing approaches, such…

cs.LG2025★ 2 cited

Improving Protein Sequence Design through Designability Preference Optimization

Fanglei Xue, Andrew Kubaney, Zhichun Guo +4

Protein sequence design methods have demonstrated strong performance in sequence generation for de novo protein design. However, as the training objective was sequence recovery, it…

cs.LG2024

YOSO: You-Only-Sample-Once via Compressed Sensing for Graph Neural Network Training

Yi Li, Zhichun Guo, Guanpeng Li +1

Graph neural networks (GNNs) have become essential tools for analyzing non-Euclidean data across various domains. During training stage, sampling plays an important role in reducin…