29 citations · 74 across the 11 of their papers we have counts for
11 papers
Nucleation feedback can drive establishment and maintenance of biased microtubule polarity in neurites
Hannah G. Scanlon, Gibarni Mahata, Anna C. Nelson +3
The microtubule cytoskeleton is comprised of dynamic, polarized filaments that facilitate transport within the cell. Polarized microtubule arrays are key to facilitating cargo tran…
Enhancing generalizability of model discovery across parameter space with multi-experiment equation learning (ME-EQL)
Maria-Veronica Ciocanel, John T. Nardini, Kevin B. Flores +3
Agent-based modeling (ABM) is a powerful tool for understanding self-organizing biological systems, but it is computationally intensive and often not analytically tractable. Equati…
Emergent microtubule properties in a model of filament turnover and nucleation
Anna C. Nelson, Scott A. McKinley, Melissa M. Rolls +1
Microtubules (MTs) are dynamic protein filaments essential for intracellular organization and transport, particularly in long-lived cells such as neurons. The plus and minus ends o…
Minimal Mechanisms of Microtubule Length Regulation in Living Cells
Anna C Nelson, Melissa M Rolls, Maria-Veronica Ciocanel +1
The microtubule cytoskeleton is responsible for sustained, long-range intracellular transport of mRNAs, proteins, and organelles in neurons. Neuronal microtubules must be stable en…
Parameter identifiability in PDE models of fluorescence recovery after photobleaching
Maria-Veronica Ciocanel, Lee Ding, Lucas Mastromatteo +4
Identifying unique parameters for mathematical models describing biological data can be challenging and often impossible. Parameter identifiability for partial differential equatio…
Applications of PDEs and Stochastic Modeling to Protein Transport in Cell Biology
Maria-Veronica Ciocanel
Intracellular transport processes are essential to the healthy development of many organisms as well as more generally to healthy cellular function. The complex dynamics and intera…
How do classroom-turnover times depend on lecture-hall size?
Joseph Benson, Mariya Bessonov, Korana Burke +4
Academic spaces in colleges and universities span classrooms for 10 students to lecture halls that hold over 600 people. During the break between consecutive classes, students from…
Actin reorganization throughout the cell cycle mediated by motor proteins
Maria-Veronica Ciocanel, Aravind Chandrasekaran, Carli Mager +3
Cortical actin networks are highly dynamic and play critical roles in shaping the mechanical properties of cells. The actin cytoskeleton undergoes significant reorganization over t…
Renewal reward perspective on linear switching diffusion systems
Maria-Veronica Ciocanel, John Fricks, Peter R. Kramer +1
In many biological systems, the movement of individual agents is commonly characterized as having multiple qualitatively distinct behaviors that arise from various biophysical stat…
Topological data analysis approaches to uncovering the timing of ring structure onset in filamentous networks
Maria-Veronica Ciocanel, Riley Juenemann, Adriana T. Dawes +1
Improvements in experimental and computational technologies have led to significant increases in data available for analysis. Topological data analysis (TDA) is an emerging area of…
Model reconstruction from temporal data for coupled oscillator networks
Mark J Panaggio, Maria-Veronica Ciocanel, Lauren Lazarus +2
In a complex system, the interactions between individual agents often lead to emergent collective behavior like spontaneous synchronization, swarming, and pattern formation. The to…