most citedBixBench: a Comprehensive Benchmark for LLM-based Agents in Computational Biology

14 citations · 33 across the 6 of their papers we have counts for

collaborators

6 papers

cs.AI2026

BixBench3: Benchmarking AI agents on research-study-scale computational biology tasks

Zane Koch, Asmamaw T. Wassie, Javier Valdes-Aleman +5

Artificial intelligence (AI) promises to accelerate biological research by automating computational analyses. Yet the ability of AI agents to execute on computational biology at th…

cs.CV2026

MarkushGlyph and OCSRGlyph: Improved Chemical Structure Recognition

Alex Andonian, Samuel G Rodriques, Andrew D White +1

Chemical structures appear in patents and the scientific literature as images. For programmatic usage, such as indexing in databases or constructing machine learning model training…

cs.AI2026

LABBench2: An Improved Benchmark for AI Systems Performing Biology Research

Jon M Laurent, Albert Bou, Michael Pieler +9

Optimism for accelerating scientific discovery with AI continues to grow. Current applications of AI in scientific research range from training dedicated foundation models on scien…

cs.LG2025★ 10 cited

Training a Scientific Reasoning Model for Chemistry

Siddharth M. Narayanan, James D. Braza, Ryan-Rhys Griffiths +6

Reasoning models are large language models that emit a long chain-of-thought before answering, providing both higher accuracy and explicit reasoning for their response. A major que…

cs.AI2025★ 9 cited

Robin: A multi-agent system for automating scientific discovery

Ali Essam Ghareeb, Benjamin Chang, Ludovico Mitchener +7

Scientific discovery is driven by the iterative process of background research, hypothesis generation, experimentation, and data analysis. Despite recent advancements in applying a…

q-bio.QM2025★ 14 cited

BixBench: a Comprehensive Benchmark for LLM-based Agents in Computational Biology

Ludovico Mitchener, Jon M Laurent, Alex Andonian +6

Large Language Models (LLMs) and LLM-based agents show great promise in accelerating scientific research. Existing benchmarks for measuring this potential and guiding future develo…