5 citations · 8 across the 8 of their papers we have counts for
8 papers
Towards AI-Assisted Clinical Trial Matching: Practical Considerations, Multicenter Evaluation, and Real-World Deployment
Yin Fang, Qiao Jin, Shubo Tian +24
Clinical trials are essential for advancing cancer care and drug development, but many fail because of insufficient patient enrollment. While there is growing interest in using AI…
Med-V1: Small Language Models for Zero-shot and Scalable Biomedical Evidence Attribution
Qiao Jin, Yin Fang, Lauren He +12
Assessing whether an article supports an assertion is essential for hallucination detection and claim verification. While large language models (LLMs) have the potential to automat…
CT-Bench: A Benchmark for Multimodal Lesion Understanding in Computed Tomography
Qingqing Zhu, Qiao Jin, Tejas S. Mathai +10
Artificial intelligence (AI) can automatically delineate lesions on computed tomography (CT) and generate radiology report content, yet progress is limited by the scarcity of publi…
Knowledge-guided Contextual Gene Set Analysis Using Large Language Models
Zhizheng Wang, Chi-Ping Day, Chih-Hsuan Wei +9
Gene set analysis (GSA) is a foundational approach for interpreting genomic data of diseases by linking genes to biological processes. However, conventional GSA methods overlook cl…
Cell-o1: Training LLMs to Solve Single-Cell Reasoning Puzzles with Reinforcement Learning
Yin Fang, Qiao Jin, Guangzhi Xiong +6
Cell type annotation is a key task in analyzing the heterogeneity of single-cell RNA sequencing data. Although recent foundation models automate this process, they typically annota…
Benchmarking Retrieval-Augmented Generation for Chemistry
Xianrui Zhong, Bowen Jin, Siru Ouyang +5
Retrieval-augmented generation (RAG) has emerged as a powerful framework for enhancing large language models (LLMs) with external knowledge, particularly in scientific domains that…
Supervising the search process produces reliable and generalizable information-seeking agents
Guangzhi Xiong, Qiao Jin, Xiao Wang +9
Large language models (LLMs) are transforming web search by shifting from document ranking to synthesizing answers, and are increasingly deployed as autonomous agentic search syste…
BioT5+: Towards Generalized Biological Understanding with IUPAC Integration and Multi-task Tuning
Qizhi Pei, Lijun Wu, Kaiyuan Gao +6
Recent research trends in computational biology have increasingly focused on integrating text and bio-entity modeling, especially in the context of molecules and proteins. However,…