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cs.CL2026
BioMatrix: Towards a Comprehensive Biological Foundation Model Spanning the Modality Matrix of Sequences, Structures, and Language
Qizhi Pei, Zhimeng Zhou, Yi Duan +9
We present BioMatrix, the first multimodal foundation model that natively integrates sequences, structures, and natural language for both molecules and proteins within a single dec…
cs.AI2026
FlowRAG: Synergizing Explicit Reasoning via Frequency-Aware Multi-Granularity Graph Flow
Bihao Zhan, Zongsheng Cao, Jie Zhou +2
Graph-based retrieval-augmented generation (GraphRAG) is effective for knowledge-intensive and multi-hop query tasks; however, many existing methods primarily seed entity-based gra…