8 citations · 10 across the 2 of their papers we have counts for
3 papers
In-depth data movement characterization of DNA read mapping algorithms
Berkan Şahin, Ecem İlgün, Klea Zambaku +1
Read mapping algorithms represent a critical bottleneck in genomic analysis pipelines due to the resources required; a problem that is becoming more pronounced as sequencing techno…
MARS: Processing-In-Memory Acceleration of Raw Signal Genome Analysis Inside the Storage Subsystem
Melina Soysal, Konstantina Koliogeorgi, Can Firtina +8
Raw signal genome analysis (RSGA) has emerged as a promising approach to enable real-time genome analysis by directly analyzing raw electrical signals. However, rapid advancements…
Processing-in-memory for genomics workloads
William Andrew Simon, Leonid Yavits, Konstantina Koliogeorgi +12
Low-cost, high-throughput DNA and RNA sequencing (HTS) data is the backbone of the life sciences. Genome sequencing is now becoming a part of Predictive, Preventive, Personalized,…