activity
20232025
most citedMPAT: Modular Petri Net Assembly Toolkit

3 citations · 4 across the 6 of their papers we have counts for

collaborators

6 papers

cs.LG2025

Forecasting Coccidioidomycosis (Valley Fever) in Arizona: A Graph Neural Network Approach

Ali Sarabi, Arash Sarabi, Hao Yan +2

Coccidioidomycosis, commonly known as Valley Fever, remains a significant public health concern in endemic regions of the southwestern United States. This study develops the first…

cs.LG2025

A Simple Approximate Bayesian Inference Neural Surrogate for Stochastic Petri Net Models

Bright Kwaku Manu, Trevor Reckell, Beckett Sterner +1

Stochastic Petri Nets (SPNs) are an increasingly popular tool of choice for modeling discrete-event dynamics in areas such as epidemiology and systems biology, yet their parameter…

math.AT2025★ 1 cited

The Basic Reproduction Number for Petri Net Models: A Next-Generation Matrix Approach

Trevor Reckell, Beckett Sterner, Petar Jevtić

The basic reproduction number () is an epidemiological metric that represents the average number of new infections caused by a single infectious individual in a completely sus…

cs.MS2024★ 3 cited

MPAT: Modular Petri Net Assembly Toolkit

Stefano Chiaradonna, Petar Jevtic, Beckett Sterner

We present a Python package called Modular Petri Net Assembly Toolkit (MPAT) that empowers users to easily create large-scale, modular Petri Nets for various spatial configurations…

q-bio.OT2024

A Numerical Comparison of Petri Net and Ordinary Differential Equation SIR Component Models

Trevor Reckell, Bright Kwaku Manu, Beckett Sterner +2

Petri Nets are an increasingly used modeling framework for the spread of disease across populations or within an individual. For example, the Susceptible-Infectious-Recovered (SIR)…

cs.CL2023

A Novel Dataset Towards Extracting Virus-Host Interactions

Rasha Alshawi, Atriya Sen, Nathan S. Upham +1

We describe a novel dataset for the automated recognition of named taxonomic and other entities relevant to the association of viruses with their hosts. We further describe some in…