3 citations · 3 across the 2 of their papers we have counts for
2 papers
q-bio.BM2025
Pi-SAGE: Permutation-invariant surface-aware graph encoder for binding affinity prediction
Sharmi Banerjee, Mostafa Karimi, Melih Yilmaz +4
Protein surface fingerprint encodes chemical and geometric features that govern protein-protein interactions and can be used to predict changes in binding affinity between two prot…
cs.LG2025★ 3 cited
Foundation model for mass spectrometry proteomics
Justin Sanders, Melih Yilmaz, Jacob H. Russell +5
Mass spectrometry is the dominant technology in the field of proteomics, enabling high-throughput analysis of the protein content of complex biological samples. Due to the complexi…