3 papers
q-bio.QM2025
PhysiBoSS-Models: A database for multiscale models
Vincent Noel, Marco Ruscone, Randy Heiland +5
PhysiBoSS is an open-source platform that integrates agent-based modeling of cell populations with intracellular stochastic Boolean networks, enabling multiscale simulations of com…
q-bio.QM2024
Building multiscale models with PhysiBoSS, an agent-based modeling tool
Marco Ruscone, Andrea Checcoli, Randy Heiland +4
Multiscale models provide a unique tool for studying complex processes that study events occurring at different scales across space and time. In the context of biological systems,…
q-bio.TO2024
Modeling the extracellular matrix in cell migration and morphogenesis: A guide for the curious biologist
Rebecca M. Crossley, Samuel Johnson, Erika Tsingos +8
The extracellular matrix (ECM) is a highly complex structure through which biochemical and mechanical signals are transmitted. In processes of cell migration, the ECM also acts as…