activity
20222026
most cited as a Two-Step Graph Generative Models for Retrosynthesis Prediction

52 citations · 74 across the 7 of their papers we have counts for

collaborators

9 papers

cs.AI2026

FREA: A Multi-Source Expert Benchmark for Reaction Feasibility Verification

Botao Yu, Bo Zhou, Daniel Adu-Ampratwum +7

As generative models and AI agents propose chemical reactions at a scale beyond expert review, feasibility verifiers decide which proposals enter synthesis planning. But do their d…

cs.AI2026

MMORF: A Multi-agent Framework for Designing Multi-objective Retrosynthesis Planning Systems

Frazier N. Baker, Trieu Nguyen, Reza Averly +4

Multi-objective retrosynthesis planning is a critical chemistry task requiring dynamic balancing of quality, safety, and cost objectives. Language model-based multi-agent systems (…

cs.CL2026

Loop, Think, & Generalize: Implicit Reasoning in Recurrent-Depth Transformers

Harsh Kohli, Srinivasan Parthasarathy, Huan Sun +1

We study implicit reasoning, i.e. the ability to combine knowledge or rules within a single forward pass. While transformer-based large language models store substantial factual kn…

cs.AI2025

LARC: Towards Human-level Constrained Retrosynthesis Planning through an Agentic Framework

Frazier N. Baker, Daniel Adu-Ampratwum, Reza Averly +3

Large language model (LLM) agent evaluators leverage specialized tools to ground the rational decision-making of LLMs, making them well-suited to aid in scientific discoveries, suc…

cs.LG2025★ 1 cited

AutoSDT: Scaling Data-Driven Discovery Tasks Toward Open Co-Scientists

Yifei Li, Hanane Nour Moussa, Ziru Chen +16

Despite long-standing efforts in accelerating scientific discovery with AI, building AI co-scientists remains challenging due to limited high-quality data for training and evaluati…

cs.AI2024★ 2 cited

ChemToolAgent: The Impact of Tools on Language Agents for Chemistry Problem Solving

Botao Yu, Frazier N. Baker, Ziru Chen +5

To enhance large language models (LLMs) for chemistry problem solving, several LLM-based agents augmented with tools have been proposed, such as ChemCrow and Coscientist. However,…

cs.AI2024★ 15 cited

LlaSMol: Advancing Large Language Models for Chemistry with a Large-Scale, Comprehensive, High-Quality Instruction Tuning Dataset

Botao Yu, Frazier N. Baker, Ziqi Chen +2

Chemistry plays a crucial role in many domains, such as drug discovery and material science. While large language models (LLMs) such as GPT-4 exhibit remarkable capabilities on nat…

cs.CL2024★ 4 cited

eCeLLM: Generalizing Large Language Models for E-commerce from Large-scale, High-quality Instruction Data

Bo Peng, Xinyi Ling, Ziru Chen +2

With tremendous efforts on developing effective e-commerce models, conventional e-commerce models show limited success in generalist e-commerce modeling, and suffer from unsatisfac…

cs.LG2022★ 52 cited

as a Two-Step Graph Generative Models for Retrosynthesis Prediction

Ziqi Chen, Oluwatosin R. Ayinde, James R. Fuchs +2

Retrosynthesis is a procedure where a target molecule is transformed into potential reactants and thus the synthesis routes can be identified. Recently, computational approaches ha…