3 papers
q-bio.GN2026
SeekRBP: Leveraging Sequence-Structure Integration with Reinforcement Learning for Receptor-Binding Protein Identification
Xiling Luo, Le Ou-Yang, Yang Shen +6
Motivation: Receptor-binding proteins (RBPs) initiate viral infection and determine host specificity, serving as key targets for phage engineering and therapy. However, the identif…
q-bio.GN2025
Computational approaches for virus host prediction: A review of methods and applications
Jiayu Shang, Cheng Peng, Jiaojiao Guan +3
Accurate prediction of virus-host interactions is critical for understanding viral ecology and developing applications like phage therapy. However, the growing number of computatio…
q-bio.GN2024
Accurate and efficient protein embedding using multi-teacher distillation learning
Jiayu Shang, Cheng Peng, Yongxin Ji +4
Motivation: Protein embedding, which represents proteins as numerical vectors, is a crucial step in various learning-based protein annotation/classification problems, including gen…