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q-bio.GN2024
MAFcounter: An efficient tool for counting the occurrences of k-mers in MAF files
Michail Patsakis, Kimonas Provatas, Ioannis Mouratidis +1
Motivation: With the rapid expansion of large-scale biological datasets, DNA and protein sequence alignments have become essential for comparative genomics and proteomics. These al…
q-bio.QM2024
MAFin: Motif Detection in Multiple Alignment Files
Michail Patsakis, Kimonas Provatas, Fotis A. Baltoumas +4
Motivation: Genome and Proteome Alignments, represented by the Multiple Alignment File (MAF) format, have become a standard approach in the field of comparative genomics and proteo…