collaborators

5 papers

q-bio.QM2025

Towards Scalable Proteomics: Opportunistic SMC Samplers on HTCondor

Matthew Carter, Lee Devlin, Alexander Philips +3

Quantitative proteomics plays a central role in uncovering regulatory mechanisms, identifying disease biomarkers, and guiding the development of precision therapies. These insights…

cs.LG2025

MACS: Multi-Agent Reinforcement Learning for Optimization of Crystal Structures

Elena Zamaraeva, Christopher M. Collins, George R. Darling +8

Geometry optimization of atomic structures is a common and crucial task in computational chemistry and materials design. Following the learning to optimize paradigm, we propose a n…

cs.RO2025

Fast and Near-Optimal Collision-Free Robot Scheduling On Paths

Duncan Adamson, Nathan Flaherty, Igor Potapov +2

In this paper, we address the problem of scheduling a set of robots to complete tasks in a laboratory environment, modelled as a graph, while avoiding collisions. We analyze the dy…

cs.DC2024

Distributed weak independent sets in hypergraphs: Upper and lower bounds

Duncan Adamson, Will Rosenbaum, Paul G. Spirakis

In this paper, we consider the problem of finding weak independent sets in a distributed network represented by a hypergraph. In this setting, each edge contains a set of r vertice…

cs.DS2024

Collision-Free Robot Scheduling

Duncan Adamson, Nathan Flaherty, Igor Potapov +1

Robots are becoming an increasingly common part of scientific work within laboratory environments. In this paper, we investigate the problem of designing \emph{schedules} for compl…