4 papers
ESL-Bench: An Event-Driven Synthetic Longitudinal Benchmark for Health Agents
Chao Li, Cailiang Liu, Ang Gao +7
Longitudinal health agents must reason across multi-source trajectories that combine continuous device streams, sparse clinical exams, and episodic life events - yet evaluating the…
Predicting Antibiotic Resistance Patterns Using Sentence-BERT: A Machine Learning Approach
Mahmoud Alwakeel, Michael E. Yarrington, Rebekah H. Wrenn +4
Antibiotic resistance poses a significant threat in in-patient settings with high mortality. Using MIMIC-III data, we generated Sentence-BERT embeddings from clinical notes and app…
Evaluating Large Language Models for Automated Clinical Abstraction in Pulmonary Embolism Registries: Performance Across Model Sizes, Versions, and Parameters
Mahmoud Alwakeel, Emory Buck, Jonathan G. Martin +6
Pulmonary embolism (PE) registries accelerate practice-improving research but depend on resource-intensive manual abstraction of radiology reports. We evaluated whether openly avai…
EHRmonize: A Framework for Medical Concept Abstraction from Electronic Health Records using Large Language Models
João Matos, Jack Gallifant, Jian Pei +1
Electronic health records (EHRs) contain vast amounts of complex data, but harmonizing and processing this information remains a challenging and costly task requiring significant c…