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20212025
most citedStructured prompt interrogation and recursive extraction of semantics (SPIRES): A method for populating knowledge bases using zero-shot learning

113 citations · 484 across the 22 of their papers we have counts for

collaborators
Showing 2022Show all

5 papers · 1 filter

cs.LG2022★ 8 cited

Analyzing historical diagnosis code data from NIH N3C and RECOVER Programs using deep learning to determine risk factors for Long Covid

Saurav Sengupta, Johanna Loomba, Suchetha Sharma +5

Post-acute sequelae of SARS-CoV-2 infection (PASC) or Long COVID is an emerging medical condition that has been observed in several patients with a positive diagnosis for COVID-19.…

cs.DB2022★ 1 cited

Ontologizing Health Systems Data at Scale: Making Translational Discovery a Reality

Tiffany J. Callahan, Adrianne L. Stefanski, Jordan M. Wyrwa +29

Background: Common data models solve many challenges of standardizing electronic health record (EHR) data, but are unable to semantically integrate all the resources needed for dee…

cs.DB2022★ 72 cited

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies

Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan +24

Similar to managing software packages, managing the ontology life cycle involves multiple complex workflows such as preparing releases, continuous quality control checking, and dep…

cs.AI2022★ 1 cited

A method for comparing multiple imputation techniques: a case study on the U.S. National COVID Cohort Collaborative

Elena Casiraghi, Rachel Wong, Margaret Hall +34

Healthcare datasets obtained from Electronic Health Records have proven to be extremely useful to assess associations between patients' predictors and outcomes of interest. However…

cs.DB2022★ 109 cited

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science

Deepak R. Unni, Sierra A. T. Moxon, Michael Bada +21

Within clinical, biomedical, and translational science, an increasing number of projects are adopting graphs for knowledge representation. Graph-based data models elucidate the int…