2 papers
cs.IT2025
A Converse For the Capacity of the Shotgun Sequencing Channel with Erasures
Mohammed Ihsan Ali, Hrishi Narayanan, Prasad Krishnan
The shotgun sequencing process involves fragmenting a long DNA sequence (input string) into numerous shorter, unordered, and overlapping segments (referred to as \emph{reads}). The…
cs.IT2024
On Achievable Rates for the Shotgun Sequencing Channel with Erasures
Hrishi Narayanan, Prasad Krishnan, Nita Parekh
In shotgun sequencing, the input string (typically, a long DNA sequence composed of nucleotide bases) is sequenced as multiple overlapping fragments of much shorter lengths (called…