activity
20242026
most citedSurfPro: Functional Protein Design Based on Continuous Surface

4 citations · 10 across the 12 of their papers we have counts for

collaborators

12 papers

cs.LG2026

Kalman Delta Networks: Uncertainty-aware Associative Memory

Ngoc Bui, Tinglin Huang, Rex Ying

Linear attention enables efficient long-context inference by compressing token history into a fixed-size recurrent memory. This compression makes each update a trade-off between in…

cs.CV2026

Predicting Immune Biomarkers with MultiModal Mixture-of-Expert Pathology Foundation Models Empowers Precision Oncology

Tianyu Liu, Ziqing Wang, Zhaokang Liang +12

Predicting immune biomarkers associated with the tumor immune microenvironment (TIME) is critical for advancing precision oncology, yet existing approaches are largely limited to s…

cs.SE2026

Steerable Instruction Following Coding Data Synthesis with Actor-Parametric Schema Co-Evolution

Tinglin Huang, Bo Chen, Xiao Zhang +2

Interpreting and following human instructions is a critical capability of large language models (LLMs) in automatic programming. However, synthesizing large-scale instruction-paire…

cs.RO2026

Efficient Long-Horizon Vision-Language-Action Models via Static-Dynamic Disentanglement

Weikang Qiu, Huashuo Lei, Tinglin Huang +1

Vision-Language-Action (VLA) models have recently emerged as a promising paradigm for generalist robotic control. Built upon vision-language model (VLM) architectures, VLAs predict…

q-bio.QM2025★ 1 cited

TeamPath: Building MultiModal Pathology Experts with Reasoning AI Copilots

Tianyu Liu, Weihao Xuan, Hao Wu +15

Advances in AI have introduced several strong models in computational pathology to usher it into the era of multi-modal diagnosis, analysis, and interpretation. However, the curren…

cs.CL2025★ 1 cited

RephQA: Evaluating Readability of Large Language Models in Public Health Question Answering

Weikang Qiu, Tinglin Huang, Ryan Rullo +4

Large Language Models (LLMs) hold promise in addressing complex medical problems. However, while most prior studies focus on improving accuracy and reasoning abilities, a significa…

q-bio.GN2025★ 1 cited

HEIST: A Graph Foundation Model for Spatial Transcriptomics and Proteomics Data

Hiren Madhu, João Felipe Rocha, Tinglin Huang +3

Single-cell transcriptomics and proteomics have become a great source for data-driven insights into biology, enabling the use of advanced deep learning methods to understand cellul…

cs.CV2025

Scalable Generation of Spatial Transcriptomics from Histology Images via Whole-Slide Flow Matching

Tinglin Huang, Tianyu Liu, Mehrtash Babadi +2

Spatial transcriptomics (ST) has emerged as a powerful technology for bridging histology imaging with gene expression profiling. However, its application has been limited by low th…

cs.LG2025

Beyond Feature Importance: Feature Interactions in Predicting Post-Stroke Rigidity with Graph Explainable AI

Jiawei Xu, Yonggeon Lee, Anthony Elkommos Youssef +6

This study addresses the challenge of predicting post-stroke rigidity by emphasizing feature interactions through graph-based explainable AI. Post-stroke rigidity, characterized by…

cs.CL2025

Experience Retrieval-Augmentation with Electronic Health Records Enables Accurate Discharge QA

Justice Ou, Tinglin Huang, Yilun Zhao +3

To improve the reliability of Large Language Models (LLMs) in clinical applications, retrieval-augmented generation (RAG) is extensively applied to provide factual medical knowledg…

q-bio.BM2024★ 4 cited

SurfPro: Functional Protein Design Based on Continuous Surface

Zhenqiao Song, Tinglin Huang, Lei Li +1

How can we design proteins with desired functions? We are motivated by a chemical intuition that both geometric structure and biochemical properties are critical to a protein's fun…

q-bio.BM2024★ 3 cited

Protein-Nucleic Acid Complex Modeling with Frame Averaging Transformer

Tinglin Huang, Zhenqiao Song, Rex Ying +1

Nucleic acid-based drugs like aptamers have recently demonstrated great therapeutic potential. However, experimental platforms for aptamer screening are costly, and the scarcity of…