2 citations · 2 across the 4 of their papers we have counts for
4 papers
Proteo-R1: Reasoning Foundation Models for De Novo Protein Design
Fang Wu, Weihao Xuan, Heli Qi +26
Deep learning in de novo protein design has achieved atomic-level fidelity. However, existing models remain largely non-deliberative: they directly synthesize molecular geometries…
Joint Design of Protein Surface and Structure Using a Diffusion Bridge Model
Guanlue Li, Xufeng Zhao, Fang Wu +1
Protein-protein interactions (PPIs) are governed by surface complementarity and hydrophobic interactions at protein interfaces. However, designing diverse and physically realistic…
Molecule Generation for Target Protein Binding with Hierarchical Consistency Diffusion Model
Guanlue Li, Chenran Jiang, Ziqi Gao +5
Effective generation of molecular structures, or new chemical entities, that bind to target proteins is crucial for lead identification and optimization in drug discovery. Despite…
Data Imputation from the Perspective of Graph Dirichlet Energy
Weiqi Zhang, Guanlue Li, Jianheng Tang +2
Data imputation is a crucial task due to the widespread occurrence of missing data. Many methods adopt a two-step approach: initially crafting a preliminary imputation (the "draft"…