activity
20242026
most citedAssembly Theory and its Relationship with Computational Complexity

2 citations · 5 across the 11 of their papers we have counts for

collaborators

11 papers

cs.FL2026

Assembly Spaces: Formal Definitions and Fast Methods for Approximating Assembly Indices

Gage Siebert, Redwan Chowdhury, Louie Slocombe +1

Assembly theory is an experimental and theoretical framework that introduces a metrological approach to detecting life, with potential applications across diverse substrates. Its t…

q-bio.BM2026

Deep-time consistency in proteome elemental composition across cellular and viral life

L. Felipe Benites, Louie Slocombe, Sara I. Walker

Proteins are constructed from a limited alphabet of ~20 amino acids, yet the origins and selection of this specific alphabet are unresolved. One largely overlooked aspect is whethe…

q-bio.BM2026

Elemental Stoichiometry as an Ecological Biosignature with Applications to Life Detection

Pilar C. Vergeli, Cole Mathis, John F. Malloy +5

The vast chemical space of possible small molecules, estimated at 10^60 compounds for molecules composed of just C, N, O, and S, is only sparsely occupied by biology. We propose th…

astro-ph.IM2026

Searching for Life-As-We-Don't-Know-It: Mission-relevant Application of Assembly Theory for Exoplanet Life Detection

Sara Walker, Estelle Janin, Evgenya Shkolnik +2

This white paper introduces a framework for applying Assembly Theory (AT) to planetary atmospheres as a biosignature framework suitable for the Habitable Worlds Observatory (HWO).…

physics.hist-ph2026

The Physics of Causation

Leroy Cronin, Sara I. Walker

Assembly theory (AT) introduces causation as a material property and establishes a metrology for objects produced by evolution and selection. The physical scale of causation is qua…

astro-ph.IM2025

A Firefly-inspired Model for Deciphering the Alien

Cameron Brooks, Estelle Janin, Gage Siebert +3

The Search for Extraterrestrial Intelligence (ETI) is, historically, a search for aliens like us, inspired by human centric ideas of intelligence and technology. However, humans ar…

q-bio.MN2025★ 1 cited

The Emergence of Chirality from Metabolism

John F. Malloy, Camerian Millsaps, Kamesh Narasimhan +4

Molecular chirality is critical to biochemical function, but it is unknown when chiral selectivity first became important in the evolutionary transition from geochemistry to bioche…

cond-mat.mtrl-sci2025

Quantifying the Complexity of Materials with Assembly Theory

Keith Y Patarroyo, Abhishek Sharma, Ian Seet +3

Quantifying the evolution and complexity of materials is of importance in many areas of science and engineering, where a central open challenge is developing experimental complexit…

q-bio.PE2024★ 1 cited

Constructing the Molecular Tree of Life using Assembly Theory and Mass Spectrometry

Amit Kahana, Alasdair MacLeod, Hessam Mehr +5

Here we demonstrate the first biochemistry-agnostic approach to map evolutionary relationships at the molecular scale, allowing the construction of phylogenetic models using mass s…

q-bio.OT2024★ 1 cited

Experimental Measurement of Assembly Indices are Required to Determine The Threshold for Life

Sara I. Walker, Cole Mathis, Stuart Marshall +1

Assembly Theory (AT) was developed to help distinguish living from non-living systems. The theory is simple as it posits that the amount of selection or Assembly is a function of t…

cs.CC2024★ 2 cited

Assembly Theory and its Relationship with Computational Complexity

Christopher P. Kempes, Michael Lachmann, Andrew Iannaccone +4

Assembly theory (AT) quantifies selection using the assembly equation and identifies complex objects that occur in abundance based on two measurements, assembly index and copy numb…