3 citations · 7 across the 11 of their papers we have counts for
11 papers
Data-Driven Discovery of Feature Groups in Clinical Time Series
Fedor Sergeev, Manuel Burger, Polina Leshetkina +3
Clinical time series data are critical for patient monitoring and predictive modeling. These time series are typically multivariate and often comprise hundreds of heterogeneous fea…
Domain Generalization and Adaptation in Intensive Care with Anchor Regression
Malte Londschien, Manuel Burger, Gunnar Rätsch +1
The performance of predictive models in clinical settings often degrades when deployed in new hospitals due to distribution shifts. This paper presents a large-scale study of causa…
Towards Foundation Models for Critical Care Time Series
Manuel Burger, Fedor Sergeev, Malte Londschien +10
Notable progress has been made in generalist medical large language models across various healthcare areas. However, large-scale modeling of in-hospital time series data - such as…
Multi-Modal Contrastive Learning for Online Clinical Time-Series Applications
Fabian Baldenweg, Manuel Burger, Gunnar Rätsch +1
Electronic Health Record (EHR) datasets from Intensive Care Units (ICU) contain a diverse set of data modalities. While prior works have successfully leveraged multiple modalities…
Dynamic Survival Analysis for Early Event Prediction
Hugo Yèche, Manuel Burger, Dinara Veshchezerova +1
This study advances Early Event Prediction (EEP) in healthcare through Dynamic Survival Analysis (DSA), offering a novel approach by integrating risk localization into alarm polici…
Learning Genomic Sequence Representations using Graph Neural Networks over De Bruijn Graphs
Kacper Kapuśniak, Manuel Burger, Gunnar Rätsch +1
The rapid expansion of genomic sequence data calls for new methods to achieve robust sequence representations. Existing techniques often neglect intricate structural details, empha…
On the Importance of Step-wise Embeddings for Heterogeneous Clinical Time-Series
Rita Kuznetsova, Alizée Pace, Manuel Burger +2
Recent advances in deep learning architectures for sequence modeling have not fully transferred to tasks handling time-series from electronic health records. In particular, in prob…
Knowledge Graph Representations to enhance Intensive Care Time-Series Predictions
Samyak Jain, Manuel Burger, Gunnar Rätsch +1
Intensive Care Units (ICU) require comprehensive patient data integration for enhanced clinical outcome predictions, crucial for assessing patient conditions. Recent deep learning…
Language Model Training Paradigms for Clinical Feature Embeddings
Yurong Hu, Manuel Burger, Gunnar Rätsch +1
In research areas with scarce data, representation learning plays a significant role. This work aims to enhance representation learning for clinical time series by deriving univers…
Multi-modal Graph Learning over UMLS Knowledge Graphs
Manuel Burger, Gunnar Rätsch, Rita Kuznetsova
Clinicians are increasingly looking towards machine learning to gain insights about patient evolutions. We propose a novel approach named Multi-Modal UMLS Graph Learning (MMUGL) fo…
Python FPGA Programming with Data-Centric Multi-Level Design
Johannes de Fine Licht, Tiziano De Matteis, Tal Ben-Nun +5
Although high-level synthesis (HLS) tools have significantly improved programmer productivity over hardware description languages, developing for FPGAs remains tedious and error pr…