activity
20232025
most citedBroken detailed balance and entropy production in directed networks

19 citations · 48 across the 13 of their papers we have counts for

collaborators

13 papers

q-bio.BM2025

A universal phase-plane model for in vivo protein aggregation

Matthew W. Cotton, Alain Goriely, David Klenerman +1

Neurodegenerative diseases are driven by the accumulation of protein aggregates in the brain of affected individuals. The aggregation behaviour in vitro is well understood and driv…

cond-mat.soft2025

Generalized invariants meet constitutive neural networks: A novel framework for hyperelastic materials

Denisa Martonová, Alain Goriely, Ellen Kuhl

The major challenge in determining a hyperelastic model for a given material is the choice of invariants and the selection how the strain energy function depends functionally on th…

physics.bio-ph2025★ 1 cited

A multiscale theory for network advection-reaction-diffusion

Hadrien Oliveri, Emilia Cozzolino, Alain Goriely

Mathematical network models are extremely useful to capture complex propagation processes between different regions (nodes), for example the spread of an infectious agent between d…

math-ph2025

The Darboux Classification of Curl Forces

Arash Yavari, Alain Goriely

We study particle dynamics under curl forces. These forces are a class of non-conservative, non-dissipative, position-dependent forces that cannot be expressed as gradient of a pot…

physics.bio-ph2025★ 7 cited

The multiscale mechanics of axon durotaxis

Christoforos Kassianides, Alain Goriely, Hadrien Oliveri

During neurodevelopment, neuronal axons navigate through the extracellular environment, guided by various cues to establish connections with distant target cells. Among other facto…

q-bio.CB2024

A Mechanical Model for the Failure of Reconstructive Breast Implant Surgery Due to Capsular Contracture

Yuqi Xiao, Leah Edelstein-Keshet, Alain Goriely +1

Capsular contracture is a pathological response to implant-based reconstructive breast surgery, where the ``capsule'' (tissue surrounding an implant) painfully thickens, contracts…

cond-mat.stat-mech2024★ 2 cited

Decomposing force fields as flows on graphs reconstructed from stochastic trajectories

Ramón Nartallo-Kaluarachchi, Paul Expert, David Beers +4

Disentangling irreversible and reversible forces from random fluctuations is a challenging problem in the analysis of stochastic trajectories measured from real-world dynamical sys…

math.DS2024★ 2 cited

A network aggregation model for the dynamics and treatment of neurodegenerative diseases at the brain scale

Georgia S. Brennan, Alain Goriely

Neurodegenerative diseases are associated with the assembly of specific proteins into oligomers and fibrillar aggregates. At the brain scale, these protein assemblies can diffuse t…

cs.RO2024

Minimal activation with maximal reach: Reachability clouds of bio-inspired slender manipulators

Bartosz Kaczmarski, Derek E. Moulton, Alain Goriely +1

In the field of soft robotics, flexibility, adaptability, and functionality define a new era of robotic systems that can safely deform, reach, and grasp. To optimize the design of…

cond-mat.soft2024

Minimal design of the elephant trunk as an active filament

Bartosz Kaczmarski, Sophie Leanza, Renee Zhao +3

One of the key problems in active materials is the control of shape through actuation. A fascinating example of such control is the elephant trunk, a long, muscular, and extremely…

physics.app-ph2024★ 13 cited

Soft cells and the geometry of seashells

Gábor Domokos, Alain Goriely, Ákos G. Horváth +1

A central problem of geometry is the tiling of space with simple structures. The classical solutions, such as triangles, squares, and hexagons in the plane and cubes and other poly…

physics.soc-ph2024★ 19 cited

Broken detailed balance and entropy production in directed networks

Ramón Nartallo-Kaluarachchi, Malbor Asllani, Gustavo Deco +3

The structure of a complex network plays a crucial role in determining its dynamical properties. In this work, we show that the the degree to which a network is directed and hierar…

physics.bio-ph2023★ 4 cited

Active shape control by plants in dynamic environments

Hadrien Oliveri, Derek E. Moulton, Heather A. Harrington +1

Plants are a paradigm for active shape control in response to stimuli. For instance, it is well-known that a tilted plant will eventually straighten vertically, demonstrating the i…