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cs.LG2026
SimpleDesign: A Joint Model for Protein Sequence and Structure Codesign
Jiarui Lu, Yuyang Wang, Yizhe Zhang +4
Proteins are fundamental to biological processes, with their function determined by the complex interplay between the amino acid sequence and the three-dimensional structure. Devel…
cs.LG2025★ 3 cited
SimpleFold: Folding Proteins is Simpler than You Think
Yuyang Wang, Jiarui Lu, Navdeep Jaitly +2
Protein folding models have achieved groundbreaking results typically via a combination of integrating domain knowledge into the architectural blocks and training pipelines. Noneth…
cs.LG2024
INRFlow: Flow Matching for INRs in Ambient Space
Yuyang Wang, Anurag Ranjan, Josh Susskind +1
Flow matching models have emerged as a powerful method for generative modeling on domains like images or videos, and even on irregular or unstructured data like 3D point clouds or…