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cs.LG2026
DrugSAGE:Self-evolving Agent Experience for Efficient State-of-the-Art Drug Discovery
Yikun Zhang, Xiwei Cheng, Tianyu Liu +2
Building state-of-the-art (SOTA) predictive models for drug discovery requires expensive search over tools, architectures, and training strategies. Current LLM-based agents can fin…
cs.LG2025
Graph Generative Pre-trained Transformer
Xiaohui Chen, Yinkai Wang, Jiaxing He +4
Graph generation is a critical task in numerous domains, including molecular design and social network analysis, due to its ability to model complex relationships and structured da…
cs.LG2025
Large Language Model is Secretly a Protein Sequence Optimizer
Yinkai Wang, Jiaxing He, Yuanqi Du +5
We consider the protein sequence engineering problem, which aims to find protein sequences with high fitness levels, starting from a given wild-type sequence. Directed evolution ha…