activity
20232026
most citedA Large Encoder-Decoder Family of Foundation Models For Chemical Language

16 citations · 19 across the 7 of their papers we have counts for

collaborators

7 papers

cs.CV2026

ProtoMedAgent: Multimodal Clinical Interpretability via Privacy-Aware Agentic Workflows

Alvaro Lopez Pellicer, Plamen Angelov, Marwan Bukhari +3

While interpretable prototype networks offer compelling case-based reasoning for clinical diagnostics, their raw continuous outputs lack the semantic structure required for medical…

cond-mat.soft2025

Understanding Structural Representation in Foundation Models for Polymers

Nathaniel H. Park, Eduardo Soares, Victor Y. Shirasuna +3

From the relative scarcity of training data to the lack of standardized benchmarks, the creation of effective foundation models for polymers faces significant and multi-faceted cha…

cs.LG2025

Towards a Foundation Model for Partial Differential Equations Across Physics Domains

Eduardo Soares, Emilio Vital Brazil, Victor Shirasuna +2

We present PDE-FM, a modular foundation model for physics-informed machine learning that unifies spatial, spectral, and temporal reasoning across heterogeneous partial differential…

cs.CE2024★ 1 cited

SELF-BART : A Transformer-based Molecular Representation Model using SELFIES

Indra Priyadarsini, Seiji Takeda, Lisa Hamada +3

Large-scale molecular representation methods have revolutionized applications in material science, such as drug discovery, chemical modeling, and material design. With the rise of…

cs.LG2024★ 16 cited

A Large Encoder-Decoder Family of Foundation Models For Chemical Language

Eduardo Soares, Victor Shirasuna, Emilio Vital Brazil +3

Large-scale pre-training methodologies for chemical language models represent a breakthrough in cheminformatics. These methods excel in tasks such as property prediction and molecu…

cs.LG2023

Improving Molecular Properties Prediction Through Latent Space Fusion

Eduardo Soares, Akihiro Kishimoto, Emilio Vital Brazil +3

Pre-trained Language Models have emerged as promising tools for predicting molecular properties, yet their development is in its early stages, necessitating further research to enh…

physics.chem-ph2023★ 2 cited

Beyond Chemical Language: A Multimodal Approach to Enhance Molecular Property Prediction

Eduardo Soares, Emilio Vital Brazil, Karen Fiorela Aquino Gutierrez +4

We present a novel multimodal language model approach for predicting molecular properties by combining chemical language representation with physicochemical features. Our approach,…