activity
20242026
most citedGene Regulatory Network Inference in the Presence of Dropouts: a Causal View

2 citations · 3 across the 15 of their papers we have counts for

collaborators

16 papers

cs.LG2026

Hessian Rank Constraint for Learning Structure of Nonlinear Latent Variable Models

Zijian Li, Ruichu Cai, Feng Xie +7

Uncovering latent variables and their causal relations from observed data is a fundamental yet challenging problem. Existing methods often rely on restrictive assumptions, such as…

cs.AI2026

Causal Discovery in the Era of Agents

Yujia Zheng, Vishal Verma, Mantej Gill +3

Recent attempts to combine large language models (LLMs) with causal discovery ask models to infer pairwise directions, propose graph structures, or inject language-model outputs as…

cs.LG2026

Causal Modeling of Selection in Evolution

Haoyue Dai, Zeyu Tang, Peter Spirtes +1

Understanding potential selection in data is crucial for causal discovery; we argue that "selection" in common narratives takes two forms, which we term static and evolutionary sel…

cs.LG2026

Score-Based Causal Discovery of Latent Variable Causal Models

Ignavier Ng, Xinshuai Dong, Haoyue Dai +3

Identifying latent variables and the causal structure involving them is essential across various scientific fields. While many existing works fall under the category of constraint-…

cs.LG2026

Distributional Equivalence in Linear Non-Gaussian Latent-Variable Cyclic Causal Models: Characterization and Learning

Haoyue Dai, Immanuel Albrecht, Peter Spirtes +1

Causal discovery with latent variables is a fundamental task. Yet most existing methods rely on strong structural assumptions, such as enforcing specific indicator patterns for lat…

cs.LG2025

Latent Variable Causal Discovery under Selection Bias

Haoyue Dai, Yiwen Qiu, Ignavier Ng +3

Addressing selection bias in latent variable causal discovery is important yet underexplored, largely due to a lack of suitable statistical tools: While various tools beyond basic…

cs.LG2025

Identification of Causal Direction under an Arbitrary Number of Latent Confounders

Wei Chen, Linjun Peng, Zhiyi Huang +4

Recovering causal structure in the presence of latent variables is an important but challenging task. While many methods have been proposed to handle it, most of them require stric…

cs.LG2025

Score-based Greedy Search for Structure Identification of Partially Observed Linear Causal Models

Xinshuai Dong, Ignavier Ng, Haoyue Dai +4

Identifying the structure of a partially observed causal system is essential to various scientific fields. Recent advances have focused on constraint-based causal discovery to solv…

cs.LG2025

Characterization and Learning of Causal Graphs with Latent Confounders and Post-treatment Selection from Interventional Data

Gongxu Luo, Loka Li, Guangyi Chen +2

Interventional causal discovery seeks to identify causal relations by leveraging distributional changes introduced by interventions, even in the presence of latent confounders. Bey…

cs.LG2025

Type Information-Assisted Self-Supervised Knowledge Graph Denoising

Jiaqi Sun, Yujia Zheng, Xinshuai Dong +2

Knowledge graphs serve as critical resources supporting intelligent systems, but they can be noisy due to imperfect automatic generation processes. Existing approaches to noise det…

cs.LG2025

When Selection Meets Intervention: Additional Complexities in Causal Discovery

Haoyue Dai, Ignavier Ng, Jianle Sun +5

We address the common yet often-overlooked selection bias in interventional studies, where subjects are selectively enrolled into experiments. For instance, participants in a drug…

cs.LG2025

Permutation-Based Rank Test in the Presence of Discretization and Application in Causal Discovery with Mixed Data

Xinshuai Dong, Ignavier Ng, Boyang Sun +6

Recent advances have shown that statistical tests for the rank of cross-covariance matrices play an important role in causal discovery. These rank tests include partial correlation…

cs.LG2025

Gene Regulatory Network Inference in the Presence of Selection Bias and Latent Confounders

Gongxu Luo, Haoyue Dai, Loka Li +3

Gene regulatory network inference (GRNI) aims to discover how genes causally regulate each other from gene expression data. It is well-known that statistical dependencies in observ…

q-bio.QM2024★ 2 cited

Gene Regulatory Network Inference in the Presence of Dropouts: a Causal View

Haoyue Dai, Ignavier Ng, Gongxu Luo +3

Gene regulatory network inference (GRNI) is a challenging problem, particularly owing to the presence of zeros in single-cell RNA sequencing data: some are biological zeros represe…

cs.LG2024

Local Causal Discovery with Linear non-Gaussian Cyclic Models

Haoyue Dai, Ignavier Ng, Yujia Zheng +2

Local causal discovery is of great practical significance, as there are often situations where the discovery of the global causal structure is unnecessary, and the interest lies so…

q-fin.ST2024★ 1 cited

On the Three Demons in Causality in Finance: Time Resolution, Nonstationarity, and Latent Factors

Xinshuai Dong, Haoyue Dai, Yewen Fan +3

Financial data is generally time series in essence and thus suffers from three fundamental issues: the mismatch in time resolution, the time-varying property of the distribution -…