activity
20232025
most citedFully automated construction of three-dimensional finite element simulations from Optical Coherence Tomography

19 citations · 38 across the 9 of their papers we have counts for

collaborators

9 papers

cond-mat.mtrl-sci2025

Nano-engineered surface enhanced Raman spectroscopy substrates for probing tissue-material interactions

Connie M. Wang, Roberta M. Sabino, Aditya Garg +3

Innovation in biomaterials has brought both breakthroughs and new challenges in medicine, as implant materials have become increasingly multifunctional and complex. One of the grea…

cs.LG2025

Anatomica: Localized Control over Geometric and Topological Properties for Anatomical Diffusion Models

Karim Kadry, Abdallah Abdelwahed, Shoaib Goraya +4

We present Anatomica: an inference-time framework for generating multi-class anatomical voxel maps with localized geo-topological control. During generation, we use cuboidal contro…

eess.IV2025

CardioComposer: Leveraging Differentiable Geometry for Compositional Control of Anatomical Diffusion Models

Karim Kadry, Shoaib Goraya, Ajay Manicka +4

Generative models of 3D cardiovascular anatomy can synthesize informative structures for clinical research and medical device evaluation, but face a trade-off between geometric con…

q-bio.QM2025

The Dissipation Theory of Aging: A Quantitative Analysis Using a Cellular Aging Map

Farhan Khodaee, Rohola Zandie, Yufan Xia +1

We propose a new theory for aging based on dynamical systems and provide a data-driven computational method to quantify the changes at the cellular level. We use ergodic theory to…

physics.bio-ph2025

Cellular Development Follows the Path of Minimum Action

Rohola Zandie, Farhan Khodaee, Yufan Xia +1

Cellular development follows a stochastic yet rule-governed trajectory, though the underlying principles remain elusive. Here, we propose that cellular development follows paths of…

eess.IV2024★ 2 cited

A Diffusion Model for Simulation Ready Coronary Anatomy with Morpho-skeletal Control

Karim Kadry, Shreya Gupta, Jonas Sogbadji +6

Virtual interventions enable the physics-based simulation of device deployment within coronary arteries. This framework allows for counterfactual reasoning by deploying the same de…

cs.CE2024★ 19 cited

Fully automated construction of three-dimensional finite element simulations from Optical Coherence Tomography

Ross Straughan, Karim Kadry, Sahil A. Parikh +2

Despite recent advances in diagnosis and treatment, atherosclerotic coronary artery diseases remain a leading cause of death worldwide. Various imaging modalities and metrics can d…

cs.CV2023★ 12 cited

Probing the Limits and Capabilities of Diffusion Models for the Anatomic Editing of Digital Twins

Karim Kadry, Shreya Gupta, Farhad R. Nezami +1

Numerical simulations can model the physical processes that govern cardiovascular device deployment. When such simulations incorporate digital twins; computational models of patien…

eess.IV2023★ 5 cited

Morphology-based non-rigid registration of coronary computed tomography and intravascular images through virtual catheter path optimization

Karim Kadry, Abhishek Karmakar, Andreas Schuh +6

Coronary computed tomography angiography (CCTA) provides 3D information on obstructive coronary artery disease, but cannot fully visualize high-resolution features within the vesse…