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cs.LG2025
Modeling Microenvironment Trajectories on Spatial Transcriptomics with NicheFlow
Kristiyan Sakalyan, Alessandro Palma, Filippo Guerranti +2
Understanding the evolution of cellular microenvironments in spatiotemporal data is essential for deciphering tissue development and disease progression. While experimental techniq…
cs.LG2025
Enforcing Latent Euclidean Geometry in Single-Cell VAEs for Manifold Interpolation
Alessandro Palma, Sergei Rybakov, Leon Hetzel +2
Latent space interpolations are a powerful tool for navigating deep generative models in applied settings. An example is single-cell RNA sequencing, where existing methods model ce…