2 papers
cs.LG2026
Traditional machine learning vs. deep learning from dynamic graph representations of proteins' 3D folds in the task of protein structure classification
Aydin Wells, Francis A. Gatsi, Aaron Striegel +1
Protein structure classification (PSC) uses supervised learning to predict a protein's CATH/SCOP(e) class from the protein's sequence or 3D structural feature(s). We already modele…
q-bio.BM2026
Unavailability of experimental 3D structural data on protein folding dynamics and necessity for a new generation of structure prediction methods in this context
Aydin Wells, Khalique Newaz, Jennifer Morones +2
Motivation: Protein folding is a dynamic process during which a protein's amino acid sequence undergoes a series of 3-dimensional (3D) conformational changes en route to reaching a…