activity
20222026
most citedBioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

1 citations · 1 across the 7 of their papers we have counts for

collaborators

7 papers

cs.CL2026

Last Translation Benchmark

Vilém Zouhar, Niyati Bafna, Mukund Choudhary +263

For scientific progress, we need benchmarks that test the limits of state-of-the-art models, and evaluation methods that inform us about failure cases. As models get stronger, stan…

cs.AI2026

Sound Agentic Science Requires Adversarial Experiments

Dionizije Fa, Marko Culjak

LLM-based agents are rapidly being adopted for scientific data analysis, automating tasks once limited by human time and expertise. This capability is often framed as an accelerati…

cs.CL2026

Sequence Repetition Enhances Token Embeddings and Improves Sequence Labeling with Decoder-only Language Models

Matija Luka Kukić, Marko Čuljak, David Dukić +2

Modern language models (LMs) are trained in an autoregressive manner, conditioned only on the prefix. In contrast, sequence labeling (SL) tasks assign labels to each individual inp…

cs.AI2026★ 1 cited

BioAgent Bench: An AI Agent Evaluation Suite for Bioinformatics

Dionizije Fa, Marko Culjak, Bruno Pandza +1

We introduce BioAgent Bench, an evaluation suite designed for measuring the performance and robustness of AI agents in common bioinformatics tasks. The suite consists of manually c…

cs.SI2025

Quotegraph: A Social Network Extracted from Millions of News Quotations

Marko Čuljak, Robert West, Andreas Spitz +1

We introduce Quotegraph, a novel large-scale social network derived from speaker-attributed quotations in English news articles published between 2008 and 2020. Quotegraph consists…

cs.CL2025

Characterizing Linguistic Shifts in Croatian News via Diachronic Word Embeddings

David Dukić, Ana Barić, Marko Čuljak +2

Measuring how semantics of words change over time improves our understanding of how cultures and perspectives change. Diachronic word embeddings help us quantify this shift, althou…

cs.CL2022

Strong Heuristics for Named Entity Linking

Marko Čuljak, Andreas Spitz, Robert West +1

Named entity linking (NEL) in news is a challenging endeavour due to the frequency of unseen and emerging entities, which necessitates the use of unsupervised or zero-shot methods.…