5 citations · 10 across the 14 of their papers we have counts for
10 papers · 1 filter
From Panel to Pixel: Zoom-In Vision-Language Pretraining from Biomedical Scientific Literature
Kun Yuan, Min Woo Sun, Zhen Chen +7
There is a growing interest in developing strong biomedical vision-language models. A popular approach to achieve robust representations is to use web-scale scientific data. Howeve…
No Tokens Wasted: Leveraging Long Context in Biomedical Vision-Language Models
Min Woo Sun, Alejandro Lozano, Javier Gamazo Tejero +8
Embedding vision-language models (VLMs) are typically pretrained with short text windows (<77 tokens), which forces the truncation of long-format captions. Yet, the distribution of…
Can Large Language Models Match the Conclusions of Systematic Reviews?
Christopher Polzak, Alejandro Lozano, Min Woo Sun +4
Systematic reviews (SR), in which experts summarize and analyze evidence across individual studies to provide insights on a specialized topic, are a cornerstone for evidence-based…
MedCaseReasoning: Evaluating and learning diagnostic reasoning from clinical case reports
Kevin Wu, Eric Wu, Rahul Thapa +7
Doctors and patients alike increasingly use Large Language Models (LLMs) to diagnose clinical cases. However, unlike domains such as math or coding, where correctness can be object…
A Large-Scale Vision-Language Dataset Derived from Open Scientific Literature to Advance Biomedical Generalist AI
Alejandro Lozano, Min Woo Sun, James Burgess +16
Despite the excitement behind biomedical artificial intelligence (AI), access to high-quality, diverse, and large-scale data - the foundation for modern AI systems - is still a bot…
MicroVQA: A Multimodal Reasoning Benchmark for Microscopy-Based Scientific Research
James Burgess, Jeffrey J Nirschl, Laura Bravo-Sánchez +20
Scientific research demands sophisticated reasoning over multimodal data, a challenge especially prevalent in biology. Despite recent advances in multimodal large language models (…
Video Action Differencing
James Burgess, Xiaohan Wang, Yuhui Zhang +5
How do two individuals differ when performing the same action? In this work, we introduce Video Action Differencing (VidDiff), the novel task of identifying subtle differences betw…
CellFlux: Simulating Cellular Morphology Changes via Flow Matching
Yuhui Zhang, Yuchang Su, Chenyu Wang +8
Building a virtual cell capable of accurately simulating cellular behaviors in silico has long been a dream in computational biology. We introduce CellFlux, an image-generative mod…
BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature
Alejandro Lozano, Min Woo Sun, James Burgess +13
The development of vision-language models (VLMs) is driven by large-scale and diverse multimodal datasets. However, progress toward generalist biomedical VLMs is limited by the lac…
Automated Generation of Challenging Multiple-Choice Questions for Vision Language Model Evaluation
Yuhui Zhang, Yuchang Su, Yiming Liu +9
The rapid development of vision language models (VLMs) demands rigorous and reliable evaluation. However, current visual question answering (VQA) benchmarks often depend on open-en…