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Separating mixtures of single-fiber orientation distributions for increased sensitivity to crossing white matter fibers
Adam M. Saunders, Gaurav Rudravaram, Michael E. Kim +10
Intro: Diffusion MRI allows for in vivo probing of brain tissue architecture via micron-level diffusion aggregated at the millimeter scale, but crossing white matter fibers decreas…
Evaluation of neuroCombat and deep learning harmonization for multi-site magnetic resonance neuroimaging in youth with prenatal alcohol exposure
Chloe Scholten, Elyssa M. McMaster, Adam M. Saunders +8
In cases of prevalent diseases and disorders, such as Prenatal Alcohol Exposure (PAE), multi-site data collection allows for increased study samples. However, multi-site studies in…
Personalized White Matter Bundle Segmentation for Early Childhood
Elyssa M. McMaster, Michael E. Kim, Nancy R. Newlin +12
White matter segmentation methods from diffusion magnetic resonance imaging range from streamline clustering-based approaches to bundle mask delineation, but none have proposed a p…
Quality assurance of the Federal Interagency Traumatic Brain Injury Research (FITBIR) database for multi-site MRI analysis
Adam M. Saunders, Michael E. Kim, Gaurav Rudravaram +8
The Federal Interagency Traumatic Brain Injury Research (FITBIR) database is a centralized data repository for traumatic brain injury (TBI) research. It includes over 45,529 magnet…
Fully Differentiable dMRI Streamline Propagation in PyTorch
Jongyeon Yoon, Elyssa M. McMaster, Michael E. Kim +4
Diffusion MRI (dMRI) provides a distinctive means to probe the microstructural architecture of living tissue, facilitating applications such as brain connectivity analysis, modelin…
DeepFixel: Crossing white matter fiber identification through spherical convolutional neural networks
Adam M. Saunders, Lucas W. Remedios, Elyssa M. McMaster +6
Diffusion-weighted magnetic resonance imaging allows for reconstruction of models for structural connectivity in the brain, such as fiber orientation distribution functions (ODFs)…