4 papers
Typed Component Algebras for Simulated Annealing and Markov-Chain Monte Carlo
Rohit Goswami, Ruhila Goswami, Amrita Goswami +3
Simulated annealing (SA) and fixed-temperature Markov-chain Monte Carlo (MCMC) run the same Metropolis-Hastings kernel over a tempered objective, but the variants appear as separat…
rsx: A high-performance streaming toolkit for RAD-seq sex determination
Rohit Goswami, Ruhila Goswami
Background Restriction site-associated DNA sequencing (RAD-seq) is widely used to discover sex-linked markers in non-model organisms, and RADSex provides the reference workflow for…
Efficient Implementation of Gaussian Process Regression Accelerated Saddle Point Searches with Application to Molecular Reactions
Rohit Goswami, Maxim Masterov, Satish Kamath +2
The task of locating first order saddle points on high-dimensional surfaces describing the variation of energy as a function of atomic coordinates is an essential step for identify…
Flowy: High performance probabilistic lava emplacement prediction
Moritz Sallermann, Amrita Goswami, Alejandro Peña-Torres +1
Lava emplacement is a complex physical phenomenon, affected by several factors. These include, but are not limited to features of the terrain, the lava settling process, the effusi…