7 papers
GGBound: A Genome-Grounded Agent for Microbial Life-Boundary Prediction
Hanbo Huang, Xuan Gong, Jing Wang +4
Characterizing the physiological life boundaries of microbial strains, including viable temperature, pH, salinity, substrate utilization, and morphology, is central to biotechnolog…
GRMLR: Knowledge-Enhanced Small-Data Learning for Deep-Sea Cold Seep Stage Inference
Chenxu Zhou, Zelin Liu, Rui Cai +7
Deep-sea cold seep stage assessment has traditionally relied on costly, high-risk manned submersible operations and visual surveys of macrofauna. Although microbial communities pro…
GEAR: Geography-knowledge Enhanced Analog Recognition Framework in Extreme Environments
Zelin Liu, Bocheng Li, Yuling Zhou +5
The Mariana Trench and the Qinghai-Tibet Plateau exhibit significant similarities in geological origins and microbial metabolic functions. Given that deep-sea biological sampling f…
Preserving Core Structures of Social Networks via Information Guided Multi-Step Graph Pruning
Yutong Hu, Bingxin Zhou, Jing Wang +2
Social networks often contain dense and overlapping connections that obscure their essential interaction patterns, making analysis and interpretation challenging. Identifying the s…
Fast and Interpretable Protein Substructure Alignment via Optimal Transport
Zhiyu Wang, Bingxin Zhou, Jing Wang +4
Proteins are essential biological macromolecules that execute life functions. Local structural motifs, such as active sites, are the most critical components for linking structure…
A Unified View on Neural Message Passing with Opinion Dynamics for Social Networks
Outongyi Lv, Bingxin Zhou, Jing Wang +3
Social networks represent a common form of interconnected data frequently depicted as graphs within the domain of deep learning-based inference. These communities inherently form d…
Numerical Modeling of Complex Porous Media For Borehole Applications
Seungoh Ryu, Weishu Zhao, Gabriela Leu +3
The diffusion/relaxation behavior of polarized spins of pore filling fluid, as often probed by NMR relaxometry, is widely used to extract information on the pore-geometry. Such inf…