37 citations · 62 across the 19 of their papers we have counts for
21 papers
Democratizing and accelerating AI-driven pathology research through agentic intelligence
Jiabo Ma, Cheng Jin, Yihui Wang +19
Computational pathology has advanced rapidly with the emergence of foundation models, yet widespread adoption remains limited by substantial technical complexity and programming re…
A Multimodal Agentic Pathology Co-pilot via Evidence Grounded Reasoning
Zhe Xu, Zhengyu Zhang, Zhiyuan Cai +26
Pathology is the cornerstone of modern medicine, where accurate decision-making relies heavily on evidence-based practices. While artificial intelligence (AI) has the potential to…
A Deployment-Friendly Foundational Framework for Efficient Computational Pathology
Yu Cai, Cheng Jin, Zhengyu Zhang +25
Pathology foundation models (PFMs) generalize well across computational pathology tasks but remain costly for gigapixel whole-slide image analysis. Here, we present LitePath, a dep…
MambaMIL+: Modeling Long-Term Contextual Patterns for Gigapixel Whole Slide Image
Qian Zeng, Yihui Wang, Shu Yang +9
Whole-slide images (WSIs) are an important data modality in computational pathology, yet their gigapixel resolution and lack of fine-grained annotations challenge conventional deep…
LLM-driven Knowledge Enhancement for Multimodal Cancer Survival Prediction
Chenyu Zhao, Yingxue Xu, Fengtao Zhou +2
Current multimodal survival prediction methods typically rely on pathology images (WSIs) and genomic data, both of which are high-dimensional and redundant, making it difficult to…
A Clinical-grade Universal Foundation Model for Intraoperative Pathology
Zihan Zhao, Fengtao Zhou, Ronggang Li +20
Intraoperative pathology is pivotal to precision surgery, yet its clinical impact is constrained by diagnostic complexity and the limited availability of high-quality frozen-sectio…
GenAR: Next-Scale Autoregressive Generation for Spatial Gene Expression Prediction
Jiarui Ouyang, Yihui Wang, Yihang Gao +3
Spatial Transcriptomics (ST) offers spatially resolved gene expression but remains costly. Predicting expression directly from widely available Hematoxylin and Eosin (H&E) stained…
A Versatile Pathology Co-pilot via Reasoning Enhanced Multimodal Large Language Model
Zhe Xu, Ziyi Liu, Junlin Hou +13
Multimodal large language models (MLLMs) have emerged as powerful tools for computational pathology, offering unprecedented opportunities to integrate pathological images with lang…
Comparative validation of surgical phase recognition, instrument keypoint estimation, and instrument instance segmentation in endoscopy: Results of the PhaKIR 2024 challenge
Tobias Rueckert, David Rauber, Raphaela Maerkl +58
Reliable recognition and localization of surgical instruments in endoscopic video recordings are foundational for a wide range of applications in computer- and robot-assisted minim…
Genome-Anchored Foundation Model Embeddings Improve Molecular Prediction from Histology Images
Cheng Jin, Fengtao Zhou, Yunfang Yu +13
Precision oncology requires accurate molecular insights, yet obtaining these directly from genomics is costly and time-consuming for broad clinical use. Predicting complex molecula…
Large-scale Self-supervised Video Foundation Model for Intelligent Surgery
Shu Yang, Fengtao Zhou, Leon Mayer +16
Computer-Assisted Intervention (CAI) has the potential to revolutionize modern surgery, with surgical scene understanding serving as a critical component in supporting decision-mak…
Segment Anything in Pathology Images with Natural Language
Zhixuan Chen, Junlin Hou, Liqi Lin +6
Pathology image segmentation is crucial in computational pathology for analyzing histological features relevant to cancer diagnosis and prognosis. However, current methods face maj…
Discovering Pathology Rationale and Token Allocation for Efficient Multimodal Pathology Reasoning
Zhe Xu, Cheng Jin, Yihui Wang +2
Multimodal pathological image understanding has garnered widespread interest due to its potential to improve diagnostic accuracy and enable personalized treatment through integrate…
Distilled Prompt Learning for Incomplete Multimodal Survival Prediction
Yingxue Xu, Fengtao Zhou, Chenyu Zhao +3
The integration of multimodal data including pathology images and gene profiles is widely applied in precise survival prediction. Despite recent advances in multimodal survival mod…
An Explainable Biomedical Foundation Model via Large-Scale Concept-Enhanced Vision-Language Pre-training
Yuxiang Nie, Sunan He, Yequan Bie +14
The clinical adoption of artificial intelligence (AI) in medical imaging requires models that are both diagnostically accurate and interpretable to clinicians. While current multim…
Towards A Generalizable Pathology Foundation Model via Unified Knowledge Distillation
Jiabo Ma, Zhengrui Guo, Fengtao Zhou +20
Foundation models pretrained on large-scale datasets are revolutionizing the field of computational pathology (CPath). The generalization ability of foundation models is crucial fo…
A Multimodal Knowledge-enhanced Whole-slide Pathology Foundation Model
Yingxue Xu, Yihui Wang, Fengtao Zhou +16
Remarkable strides in computational pathology have been made in the task-agnostic foundation model that advances the performance of a wide array of downstream clinical tasks. Despi…
Visual Mamba: A Survey and New Outlooks
Rui Xu, Shu Yang, Yihui Wang +3
Mamba, a recent selective structured state space model, excels in long sequence modeling, which is vital in the large model era. Long sequence modeling poses significant challenges…
GSCo: Towards Generalizable AI in Medicine via Generalist-Specialist Collaboration
Sunan He, Yuxiang Nie, Hongmei Wang +21
Generalist foundation models (GFMs) are renowned for their exceptional capability and flexibility in effectively generalizing across diverse tasks and modalities. In the field of m…
MambaMIL: Enhancing Long Sequence Modeling with Sequence Reordering in Computational Pathology
Shu Yang, Yihui Wang, Hao Chen
Multiple Instance Learning (MIL) has emerged as a dominant paradigm to extract discriminative feature representations within Whole Slide Images (WSIs) in computational pathology. D…
HistGen: Histopathology Report Generation via Local-Global Feature Encoding and Cross-modal Context Interaction
Zhengrui Guo, Jiabo Ma, Yingxue Xu +3
Histopathology serves as the gold standard in cancer diagnosis, with clinical reports being vital in interpreting and understanding this process, guiding cancer treatment and patie…