16 papers
Merlin Plus: A Large-Scale, Multi-Cancer, Image-Mask-Report Dataset
Pedro R. A. S. Bassi, Wenxuan Li, Szymon Plotka +10
Multi-cancer segmentation in computed tomography (CT) is fundamentally limited by the scarcity of tumor masks across different organs. We present Merlin Plus, the first large-scale…
Gaussian Meta-Space Augmentation for Stacking Ensembles in Multimodal IPMN Risk Stratification
Max A. Nelson, Eminenur Sen Tasci, Zhixiang Wang +12
Pancreatic cancer is among the most lethal malignancies; risk stratification of intraductal papillary mucinous neoplasms (IPMNs) offers a crucial opportunity for early intervention…
BenchX: Benchmarking AI Models for Cancer Detection and Localization with Demographic and Protocol Biases
Qi Chen, Wenxuan Li, Pedro R. A. S. Bassi +14
Artificial intelligence (AI) has achieved remarkable success in medical imaging, but it is widely recognized that these models often perform inconsistently across real-world clinic…
Beyond Masks: The Case for Medical Image Parsing
Siddharth Gupta, Alan L. Yuille, Zongwei Zhou
Medical imaging research has spent a decade getting very good at one thing: producing per-voxel masks. Masks tell us size, volume, and location, and a decade of clinical infrastruc…
RadThinking: A Dataset for Longitudinal Clinical Reasoning in Radiology
Wenxuan Li, Pedro R. A. S. Bassi, Xinze Zhou +3
Cancer screening is a reasoning task. A radiologist observes findings, compares them to prior scans, integrates clinical context, and reaches a diagnostic conclusion confirmed by p…
DeepTumorVQA: A Hierarchical 3D CT Benchmark for Stage-Wise Evaluation of Medical VLMs and Tool-Augmented Agents
Yixiong Chen, Wenjie Xiao, Pedro R. A. S. Bassi +7
Medical vision-language models (VLMs) and AI agents have made significant progress in learning to analyze and reason about clinical images. However, existing medical visual questio…
Distilling Photon-Counting CT into Routine Chest CT through Clinically Validated Degradation Modeling
Junqi Liu, Xinze Zhou, Wenxuan Li +10
Photon-counting CT (PCCT) provides superior image quality with higher spatial resolution and lower noise compared to conventional energy-integrating CT (EICT), but its limited clin…
Large-Scale Label Quality Assessment for Medical Segmentation via a Vision-Language Judge and Synthetic Data
Yixiong Chen, Zongwei Zhou, Wenxuan Li +1
Large-scale medical segmentation datasets often combine manual and pseudo-labels of uneven quality, which can compromise training and evaluation. Low-quality labels may hamper perf…
Auditing Significance, Metric Choice, and Demographic Fairness in Medical AI Challenges
Ariel Lubonja, Pedro R. A. S. Bassi, Wenxuan Li +4
Open challenges have become the de facto standard for comparative ranking of medical AI methods. Despite their importance, medical AI leaderboards exhibit three persistent limitati…
See More, Change Less: Anatomy-Aware Diffusion for Contrast Enhancement
Junqi Liu, Zejun Wu, Pedro R. A. S. Bassi +15
Image enhancement improves visual quality and helps reveal details that are hard to see in the original image. In medical imaging, it can support clinical decision-making, but curr…
Scaling Tumor Segmentation: Best Lessons from Real and Synthetic Data
Qi Chen, Xinze Zhou, Chen Liu +11
AI for tumor segmentation is limited by the lack of large, voxel-wise annotated datasets, which are hard to create and require medical experts. In our proprietary JHH dataset of 3,…
Scaling Artificial Intelligence for Multi-Tumor Early Detection with More Reports, Fewer Masks
Pedro R. A. S. Bassi, Xinze Zhou, Wenxuan Li +20
Early tumor detection save lives. Each year, more than 300 million computed tomography (CT) scans are performed worldwide, offering a vast opportunity for effective cancer screenin…
Learning Segmentation from Radiology Reports
Pedro R. A. S. Bassi, Wenxuan Li, Jieneng Chen +8
Tumor segmentation in CT scans is key for diagnosis, surgery, and prognosis, yet segmentation masks are scarce because their creation requires time and expertise. Public abdominal…
PanTS: The Pancreatic Tumor Segmentation Dataset
Wenxuan Li, Xinze Zhou, Qi Chen +15
PanTS is a large-scale, multi-institutional dataset curated to advance research in pancreatic CT analysis. It contains 36,390 CT scans from 145 medical centers, with expert-validat…
ShapeKit
Junqi Liu, Dongli He, Wenxuan Li +3
In this paper, we present a practical approach to improve anatomical shape accuracy in whole-body medical segmentation. Our analysis shows that a shape-focused toolkit can enhance…
Are Pixel-Wise Metrics Reliable for Sparse-View Computed Tomography Reconstruction?
Tianyu Lin, Xinran Li, Chuntung Zhuang +5
Widely adopted evaluation metrics for sparse-view CT reconstruction--such as Structural Similarity Index Measure and Peak Signal-to-Noise Ratio--prioritize pixel-wise fidelity but…