16 citations · 24 across the 9 of their papers we have counts for
10 papers
NMR Elucidation as an Agentic Search Problem, Not a Modeling Problem
Irina Espejo Morales, Damon Hinz, Marvin Alberts +3
Structural elucidation from Nuclear Magnetic Resonance (NMR) data remains a fundamental bottleneck across chemistry, materials science, and biology. We demonstrate that an agentic…
Emergent Transfer of a Physics Foundation Model from Simulation to Laboratory Turbulence
Payel Mukhopadhyay, Stefan S. Nixon, Romain Watteaux +20
Whether physics foundation models can be usefully deployed on laboratory experiments remains an open question for scientific machine learning (ML). We test this question on the Ray…
MIMIC: A Generative Multimodal Foundation Model for Biomolecules
Siavash Golkar, Jake Kovalic, Irina Espejo Morales +28
Biological function emerges from coupled constraints across sequence, structure, regulation, evolution, and cellular context, yet most foundation models in biology are trained with…
Predicting partially observable dynamical systems via diffusion models with a multiscale inference scheme
Rudy Morel, Francesco Pio Ramunno, Jeff Shen +18
Conditional diffusion models provide a natural framework for probabilistic prediction of dynamical systems and have been successfully applied to fluid dynamics and weather predicti…
Universal Spectral Tokenization via Self-Supervised Panchromatic Representation Learning
Jeff Shen, Francois Lanusse, Liam Holden Parker +24
Sequential scientific data span many resolutions and domains, and unifying them into a common representation is a key step toward developing foundation models for the sciences. Ast…
Walrus: A Cross-Domain Foundation Model for Continuum Dynamics
Michael McCabe, Payel Mukhopadhyay, Tanya Marwah +22
Foundation models have transformed machine learning for language and vision, but achieving comparable impact in physical simulation remains a challenge. Data heterogeneity and unst…
AION-1: Omnimodal Foundation Model for Astronomical Sciences
Liam Parker, Francois Lanusse, Jeff Shen +24
While foundation models have shown promise across a variety of fields, astronomy still lacks a unified framework for joint modeling across its highly diverse data modalities. In th…
Contextual Counting: A Mechanistic Study of Transformers on a Quantitative Task
Siavash Golkar, Alberto Bietti, Mariel Pettee +12
Transformers have revolutionized machine learning across diverse domains, yet understanding their behavior remains crucial, particularly in high-stakes applications. This paper int…
Multiple Physics Pretraining for Physical Surrogate Models
Michael McCabe, Bruno Régaldo-Saint Blancard, Liam Holden Parker +11
We introduce multiple physics pretraining (MPP), an autoregressive task-agnostic pretraining approach for physical surrogate modeling of spatiotemporal systems with transformers. I…
xVal: A Continuous Numerical Tokenization for Scientific Language Models
Siavash Golkar, Mariel Pettee, Michael Eickenberg +11
Due in part to their discontinuous and discrete default encodings for numbers, Large Language Models (LLMs) have not yet been commonly used to process numerically-dense scientific…