2 papers
cs.HC2025
EasyVitessce: auto-magically adding interactivity to Scverse single-cell and spatial biology plots
Selena Luo, Mark S. Keller, Tabassum Kakar +2
EasyVitessce is a Python package that turns existing static Scanpy and SpatialData plots into interactive visualizations by virtue of adding a single line of Python code. The packa…
q-bio.QM2025
Interactive visualization of kidney micro-compartmental segmentations and associated pathomics on whole slide images
Mark S. Keller, Nicholas Lucarelli, Yijiang Chen +13
Application of machine learning techniques enables segmentation of functional tissue units in histology whole-slide images (WSIs). We built a pipeline to apply previously validated…