3 citations · 3 across the 4 of their papers we have counts for
5 papers
Probe Before You Edit: Probing-Guided Molecular Optimization for LLM Agents in Structure-Based Drug Design
Zaifei Yang, Weiyu Chen, Yaqing Wang +1
Structure-based drug design increasingly employs LLM agents to iteratively refine ligands against a target pocket, yet a viable ligand must satisfy two often-conflicting objectives…
Enhancing Protein-Protein Interaction Prediction with Hierarchical Motif-based Multimodal Protein Embedding
Zaifei Yang, Samuel Ping-Man Choi, James Kwok
Protein-protein interactions (PPIs) are essential for many biological processes. However, existing PPI prediction approaches suffer from two major limitations: they overlook the hi…
KnowMol: Advancing Molecular Large Language Models with Multi-Level Chemical Knowledge
Zaifei Yang, Hong Chang, Ruibing Hou +2
The molecular large language models have garnered widespread attention due to their promising potential on molecular applications. However, current molecular large language models…
HERM: Benchmarking and Enhancing Multimodal LLMs for Human-Centric Understanding
Keliang Li, Zaifei Yang, Jiahe Zhao +5
The significant advancements in visual understanding and instruction following from Multimodal Large Language Models (MLLMs) have opened up more possibilities for broader applicati…
Accurate and interpretable drug-drug interaction prediction enabled by knowledge subgraph learning
Yaqing Wang, Zaifei Yang, Quanming Yao
Background: Discovering potential drug-drug interactions (DDIs) is a long-standing challenge in clinical treatments and drug developments. Recently, deep learning techniques have b…