activity
19992014
most citedBiomolecular electrostatics using a fast multipole BEM on up to 512 GPUs and a billion unknowns

86 citations · 160 across the 5 of their papers we have counts for

collaborators

5 papers

cs.DC2014★ 8 cited

A GRASS GIS parallel module for radio-propagation predictions

Lucas Benedičič, Felipe A. Cruz, Tsuyoshi Hamada +1

Geographical information systems are ideal candidates for the application of parallel programming techniques, mainly because they usually handle large data sets. To help us deal wi…

cs.CE2010★ 86 cited

Biomolecular electrostatics using a fast multipole BEM on up to 512 GPUs and a billion unknowns

Rio Yokota, Jaydeep P. Bardhan, Matthew G. Knepley +2

We present teraflop-scale calculations of biomolecular electrostatics enabled by the combination of algorithmic and hardware acceleration. The algorithmic acceleration is achieved…

astro-ph2007★ 6 cited

PGPG: An Automatic Generator of Pipeline Design for Programmable GRAPE Systems

Tsuyoshi Hamada, Toshiyuki Fukushige, Junichiro Makino

We have developed PGPG (Pipeline Generator for Programmable GRAPE), a software which generates the low-level design of the pipeline processor and communication software for FPGA-ba…

astro-ph2007★ 36 cited

The Chamomile Scheme: An Optimized Algorithm for N-body simulations on Programmable Graphics Processing Units

Tsuyoshi Hamada, Toshiaki Iitaka

We present an algorithm named "Chamomile Scheme". The scheme is fully optimized for calculating gravitational interactions on the latest programmable Graphics Processing Unit (GPU)…

astro-ph1999★ 24 cited

PROGRAPE-1: A Programmable, Multi-Purpose Computer for Many-Body Simulations

Tsuyoshi Hamada, Toshiyuki Fukushige, Atsushi Kawai +1

We have developed PROGRAPE-1 (PROgrammable GRAPE-1), a programmable multi-purpose computer for many-body simulations. The main difference between PROGRAPE-1 and "traditional" GRAPE…