24 citations · 58 across the 11 of their papers we have counts for
10 papers · 1 filter
scGTN: Deep Siamese Graph Transformer Network for Single-cell RNA Sequencing Clustering
Jinke Wu, Yifan Wang, Siyu Yi +5
Single-cell RNA sequencing (scRNA-seq) serves a pivotal role in characterizing gene expression at the cellular level, enabling the identification of cell types and advancing the un…
PepALD: Macrocyclic Peptide Generation via Autoregressive Latent Diffusion
Junming Zhang, Siyu Yi, Wei Ju +1
Macrocyclic peptides are promising therapeutic candidates for intracellular targets, but their design requires simultaneous control over non-natural monomer chemistry, ring topolog…
CMGL: Confidence-guided Multi-omics Graph Learning for Cancer Subtype Classification
Boyang Fan, Hengchuang Yin, Siyu Yi +5
Motivation: Multi-omics integration can improve cancer subtyping, but modality informativeness and noise vary across cancer types and patients. Most graph methods for multi-omics d…
Identifying and Correcting Label Noise for Robust GNNs via Influence Contradiction
Wei Ju, Wei Zhang, Siyu Yi +6
Graph Neural Networks (GNNs) have shown remarkable capabilities in learning from graph-structured data with various applications such as social analysis and bioinformatics. However…
Cluster-guided Contrastive Class-imbalanced Graph Classification
Wei Ju, Zhengyang Mao, Siyu Yi +6
This paper studies the problem of class-imbalanced graph classification, which aims at effectively classifying the graph categories in scenarios with imbalanced class distributions…
Hypergraph-enhanced Dual Semi-supervised Graph Classification
Wei Ju, Zhengyang Mao, Siyu Yi +6
In this paper, we study semi-supervised graph classification, which aims at accurately predicting the categories of graphs in scenarios with limited labeled graphs and abundant unl…
Towards Graph Contrastive Learning: A Survey and Beyond
Wei Ju, Yifan Wang, Yifang Qin +10
In recent years, deep learning on graphs has achieved remarkable success in various domains. However, the reliance on annotated graph data remains a significant bottleneck due to i…
COOL: A Conjoint Perspective on Spatio-Temporal Graph Neural Network for Traffic Forecasting
Wei Ju, Yusheng Zhao, Yifang Qin +6
This paper investigates traffic forecasting, which attempts to forecast the future state of traffic based on historical situations. This problem has received ever-increasing attent…
A Survey of Graph Neural Networks in Real world: Imbalance, Noise, Privacy and OOD Challenges
Wei Ju, Siyu Yi, Yifan Wang +10
Graph-structured data exhibits universality and widespread applicability across diverse domains, such as social network analysis, biochemistry, financial fraud detection, and netwo…
A Survey of Data-Efficient Graph Learning
Wei Ju, Siyu Yi, Yifan Wang +4
Graph-structured data, prevalent in domains ranging from social networks to biochemical analysis, serve as the foundation for diverse real-world systems. While graph neural network…