10 citations · 19 across the 10 of their papers we have counts for
11 papers
RAGCell: Retrieval-Augmented Generation as Supervision for Versatile Single-cell Analysis
Tianyu Liu, Fan Zhang, Jiayuan Chen +10
Single-cell foundation models (scFMs) are transforming computational biology by enabling generalizable, task-agnostic representations for versatile single-cell analysis. Despite th…
MultiDx: A Multi-Source Knowledge Integration Framework towards Diagnostic Reasoning
Yimin Deng, Zhenxi Lin, Yejing Wang +9
Diagnostic prediction and clinical reasoning are critical tasks in healthcare applications. While Large Language Models (LLMs) have shown strong capabilities in commonsense reasoni…
AdapTime: Enabling Adaptive Temporal Reasoning in Large Language Models
Yimin Deng, Yejing Wang, Zhenxi Lin +8
Large language models have demonstrated strong reasoning capabilities in general knowledge question answering. However, their ability to handle temporal information remains limited…
Harnessing Large Language Models for Knowledge Graph Question Answering via Adaptive Multi-Aspect Retrieval-Augmentation
Derong Xu, Xinhang Li, Ziheng Zhang +7
Large Language Models (LLMs) demonstrate remarkable capabilities, yet struggle with hallucination and outdated knowledge when tasked with complex knowledge reasoning, resulting in…
Mitigating Hallucinations of Large Language Models in Medical Information Extraction via Contrastive Decoding
Derong Xu, Ziheng Zhang, Zhihong Zhu +7
The impressive capabilities of large language models (LLMs) have attracted extensive interests of applying LLMs to medical field. However, the complex nature of clinical environmen…
Multi-perspective Improvement of Knowledge Graph Completion with Large Language Models
Derong Xu, Ziheng Zhang, Zhenxi Lin +6
Knowledge graph completion (KGC) is a widely used method to tackle incompleteness in knowledge graphs (KGs) by making predictions for missing links. Description-based KGC leverages…
Editing Factual Knowledge and Explanatory Ability of Medical Large Language Models
Derong Xu, Ziheng Zhang, Zhihong Zhu +9
Model editing aims to precisely alter the behaviors of large language models (LLMs) in relation to specific knowledge, while leaving unrelated knowledge intact. This approach has p…
Biomedical Entity Linking as Multiple Choice Question Answering
Zhenxi Lin, Ziheng Zhang, Xian Wu +1
Although biomedical entity linking (BioEL) has made significant progress with pre-trained language models, challenges still exist for fine-grained and long-tailed entities. To addr…
Improving Biomedical Entity Linking with Retrieval-enhanced Learning
Zhenxi Lin, Ziheng Zhang, Xian Wu +1
Biomedical entity linking (BioEL) has achieved remarkable progress with the help of pre-trained language models. However, existing BioEL methods usually struggle to handle rare and…
Emerging Drug Interaction Prediction Enabled by Flow-based Graph Neural Network with Biomedical Network
Yongqi Zhang, Quanming Yao, Ling Yue +4
Accurately predicting drug-drug interactions (DDI) for emerging drugs, which offer possibilities for treating and alleviating diseases, with computational methods can improve patie…
Relation-aware Ensemble Learning for Knowledge Graph Embedding
Ling Yue, Yongqi Zhang, Quanming Yao +5
Knowledge graph (KG) embedding is a fundamental task in natural language processing, and various methods have been proposed to explore semantic patterns in distinctive ways. In thi…