1 citations · 1 across the 5 of their papers we have counts for
5 papers
Maximum Cliques in Protein Structure Comparison
Noël Malod-Dognin, Rumen Andonov, Nicola Yanev
Computing the similarity between two protein structures is a crucial task in molecular biology, and has been extensively investigated. Many protein structure comparison methods can…
Solving Maximum Clique Problem for Protein Structure Similarity
Noël Malod-Dognin, Rumen Andonov, Nicola Yanev
A basic assumption of molecular biology is that proteins sharing close three-dimensional (3D) structures are likely to share a common function and in most cases derive from a same…
Towards Structural Classification of Proteins based on Contact Map Overlap
Rumen Andonov, Nicola Yanev, Noël Malod-Dognin
A multitude of measures have been proposed to quantify the similarity between protein 3-D structure. Among these measures, contact map overlap (CMO) maximization deserved sustained…
Recent Advances in Solving the Protein Threading Problem
Rumen Andonov, Guillaume Collet, Jean-François Gibrat +3
The fold recognition methods are promissing tools for capturing the structure of a protein by its amino acid residues sequence but their use is still restricted by the needs of hug…
Lagrangian Approaches for a class of Matching Problems in Computational Biology
Nicola Yanev, Rumen Andonov, Philippe Veber +1
This paper presents efficient algorithms for solving the problem of aligning a protein structure template to a query amino-acid sequence, known as protein threading problem. We con…