2 citations · 2 across the 16 of their papers we have counts for
19 papers
TACT-KV: Tri-Axis Cosine Transform for Compressing Volumetric KV Caches in Medical VLMs
Chongyu Qu, Ritchie Zhao, Yufan He +12
Vision-language models (VLMs) applied to 3D medical scans face a structural memory wall. A single CT or MRI volume produces tens of thousands of vision tokens, and the resulting ke…
STRATA: Reinforcement-driven Active Sampling with Tri-paradigm Adaptation for Efficient 3D Spatial Transcriptomics
Junchao Zhu, Ruining Deng, Chongyu Qu +7
Spatial transcriptomics (ST) enables joint characterization of tissue morphology and gene expression. However, 3D volumetric ST acquisition remains expensive. AI-driven methods off…
OpenMASC: An Open-Source Pipeline for Cross-Trajectory Metal-Aware Sampling and Correction in Accelerated MRI
Zhengyi Lu, Ming Lu, Chongyu Qu +11
Metal implants corrupt MRI measurements throughout -space, yet existing accelerated MRI methods assume clean data and most metal artifact reduction approaches assume fully sampl…
DRIFT: Direct-Recursive Intervention-Conditioned Forecasting of ICU Physiological Trajectories
Weixin Liu, Juming Xiong, Congning Ni +4
Many time-series forecasts depend not only on prior observations but also on actions specified during the forecast period. In intensive care units (ICUs), future vital signs and la…
SAGEAgent: A Self-Evolving Agent for Cost-Aware Modality Acquisition in Multimodal Survival Prediction
Chongyu Qu, Can Cui, Zhengyi Lu +8
Does every cancer patient truly need a complete diagnostic workup for accurate survival prediction? In multimodal clinical oncology, diagnostic modalities follow a clinically manda…
MORI-Seg: Learning Morphological Geometry for Instance Segmentation without Instance Annotations
Leiyue Zhao, Tianyu Shi, Daniel Reisenbuchler +12
Instance-level quantification of kidney functional units is essential for morphometric analysis, yet most publicly available pathology datasets provide only semantic segmentation a…
DUET: Dual-Paradigm Adaptive Expert Triage with Single-cell Inductive Prior for Spatial Transcriptomics Prediction
Junchao Zhu, Ruining Deng, Junlin Guo +11
Inferring spatially resolved gene expression from histology images offers a cost-effective complement to spatial transcriptomics (ST). However, existing methods reduce this task to…
VIP: Visual-guided Prompt Evolution for Efficient Dense Vision-Language Inference
Hao Zhu, Shuo Jin, Wenbin Liao +4
Pursuing training-free open-vocabulary semantic segmentation in an efficient and generalizable manner remains challenging due to the deep-seated spatial bias in CLIP. To overcome t…
Explainable Pathomics Feature Visualization via Correlation-aware Conditional Feature Editing
Yuechen Yang, Junlin Guo, Ruining Deng +9
Pathomics is a recent approach that offers rich quantitative features beyond what black-box deep learning can provide, supporting more reproducible and explainable biomarkers in di…
MASC: Metal-Aware Sampling and Correction via Reinforcement Learning for Accelerated MRI
Zhengyi Lu, Ming Lu, Chongyu Qu +11
Metal implants in MRI cause severe artifacts that degrade image quality and hinder clinical diagnosis. Traditional approaches address metal artifact reduction (MAR) and accelerated…
AdaFuse: Adaptive Multimodal Fusion for Lung Cancer Risk Prediction via Reinforcement Learning
Chongyu Qu, Zhengyi Lu, Yuxiang Lai +10
Multimodal fusion has emerged as a promising paradigm for disease diagnosis and prognosis, integrating complementary information from heterogeneous data sources such as medical ima…
SCR2-ST: Combine Single Cell with Spatial Transcriptomics for Efficient Active Sampling via Reinforcement Learning
Junchao Zhu, Ruining Deng, Junlin Guo +13
Spatial transcriptomics (ST) is an emerging technology that enables researchers to investigate the molecular relationships underlying tissue morphology. However, acquiring ST data…
HistoWAS: A Pathomics Framework for Large-Scale Feature-Wide Association Studies of Tissue Topology and Patient Outcomes
Yuechen Yang, Junlin Guo, Yanfan Zhu +10
High-throughput "pathomic" analysis of Whole Slide Images (WSIs) offers new opportunities to study tissue characteristics and for biomarker discovery. However, the clinical relevan…
How Close Are We? Limitations and Progress of AI Models in Banff Lesion Scoring
Yanfan Zhu, Juming Xiong, Ruining Deng +7
The Banff Classification provides the global standard for evaluating renal transplant biopsies, yet its semi-quantitative nature, complex criteria, and inter-observer variability p…
Evaluating New AI Cell Foundation Models on Challenging Kidney Pathology Cases Unaddressed by Previous Foundation Models
Runchen Wang, Junlin Guo, Siqi Lu +12
Accurate cell nuclei segmentation is critical for downstream tasks in kidney pathology and remains a major challenge due to the morphological diversity and imaging variability of r…
MedFoundationHub: A Lightweight and Secure Toolkit for Deploying Medical Vision Language Foundation Models
Xiao Li, Yanfan Zhu, Ruining Deng +6
Recent advances in medical vision-language models (VLMs) open up remarkable opportunities for clinical applications such as automated report generation, copilots for physicians, an…
DyMorph-B2I: Dynamic and Morphology-Guided Binary-to-Instance Segmentation for Renal Pathology
Leiyue Zhao, Yuechen Yang, Yanfan Zhu +7
Accurate morphological quantification of renal pathology functional units relies on instance-level segmentation, yet most existing datasets and automated methods provide only binar…
Scale-up Unlearnable Examples Learning with High-Performance Computing
Yanfan Zhu, Issac Lyngaas, Murali Gopalakrishnan Meena +8
Recent advancements in AI models are structured to retain user interactions, which could inadvertently include sensitive healthcare data. In the healthcare field, particularly when…
Persistence Image from 3D Medical Image: Superpixel and Optimized Gaussian Coefficient
Yanfan Zhu, Yash Singh, Khaled Younis +2
Topological data analysis (TDA) uncovers crucial properties of objects in medical imaging. Methods based on persistent homology have demonstrated their advantages in capturing topo…