2 citations · 6 across the 9 of their papers we have counts for
17 papers · 1 filter
VDW-GNNs: Vector diffusion wavelets for geometric graph neural networks
David R. Johnson, Alexander Sietsema, Rishabh Anand +3
We introduce vector diffusion wavelets (VDWs), a novel family of wavelets inspired by the vector diffusion maps algorithm that was introduced to analyze data lying in the tangent b…
BrainDyn: A Sheaf Neural ODE for Generative Brain Dynamics
Siddharth Viswanath, Panayiotis Ketonis, Chen Liu +3
Efficient neural network models that generate brain-like dynamic activity can be a valuable resource for generating synthetic data, analyzing differences in brain transients under…
Dispersion Loss Counteracts Embedding Condensation and Improves Generalization in Small Language Models
Chen Liu, Xingzhi Sun, Xi Xiao +8
Large language models (LLMs) achieve remarkable performance through ever-increasing parameter counts, but scaling incurs steep computational costs. To better understand LLM scaling…
MIOFlow 2.0: A unified framework for inferring cellular stochastic dynamics from single cell and spatial transcriptomics data
Xingzhi Sun, João Felipe Rocha, Brett Phelan +11
Understanding cellular trajectories via time-resolved single-cell transcriptomics is vital for studying development, regeneration, and disease. A key challenge is inferring continu…
CellForge: Agentic Design of Virtual Cell Models
Xiangru Tang, Zhuoyun Yu, Jiapeng Chen +12
Virtual cell modeling aims to predict cellular responses to diverse perturbations but faces challenges from biological complexity, multimodal data heterogeneity, and the need for i…
A Graph Laplacian Eigenvector-based Pre-training Method for Graph Neural Networks
Howard Dai, Nyambura Njenga, Hiren Madhu +4
The development of self-supervised graph pre-training methods is a crucial ingredient in recent efforts to design robust graph foundation models (GFMs). Structure-based pre-trainin…