most citedMaximum Likelihood de novo reconstruction of viral populations using paired end sequencing data

12 citations · 13 across the 2 of their papers we have counts for

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2 papers

q-bio.PE2015★ 12 cited

Maximum Likelihood de novo reconstruction of viral populations using paired end sequencing data

Raunaq Malhotra, Manjari Mukhopadhyay Steven Wu, Allen Rodrigo +2

We present MLEHaplo, a maximum likelihood de novo assembly algorithm for reconstructing viral haplotypes in a virus population from paired-end next generation sequencing (NGS) data…

q-bio.PE2007★ 1 cited

Maximum Likelihood Supertrees

Mike Steel, Allen Rodrigo

We analyse a maximum-likelihood approach for combining phylogenetic trees into a larger `supertree'. This is based on a simple exponential model of phylogenetic error, which ensure…