3 citations · 7 across the 9 of their papers we have counts for
5 papers · 1 filter
Geometric Point Attention Transformer for 3D Shape Reassembly
Jiahan Li, Chaoran Cheng, Jianzhu Ma +1
Shape assembly, which aims to reassemble separate parts into a complete object, has gained significant interest in recent years. Existing methods primarily rely on networks to pred…
Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension
Jiahan Li, Tong Chen, Shitong Luo +7
Peptides, short chains of amino acids, interact with target proteins, making them a unique class of protein-based therapeutics for treating human diseases. Recently, deep generativ…
FAFE: Immune Complex Modeling with Geodesic Distance Loss on Noisy Group Frames
Ruidong Wu, Ruihan Guo, Rui Wang +7
Despite the striking success of general protein folding models such as AlphaFold2(AF2, Jumper et al. (2021)), the accurate computational modeling of antibody-antigen complexes rema…
Full-Atom Peptide Design based on Multi-modal Flow Matching
Jiahan Li, Chaoran Cheng, Zuofan Wu +5
Peptides, short chains of amino acid residues, play a vital role in numerous biological processes by interacting with other target molecules, offering substantial potential in drug…
Categorical Flow Matching on Statistical Manifolds
Chaoran Cheng, Jiahan Li, Jian Peng +1
We introduce Statistical Flow Matching (SFM), a novel and mathematically rigorous flow-matching framework on the manifold of parameterized probability measures inspired by the resu…