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q-bio.QM2024
PhaGO: Protein function annotation for bacteriophages by integrating the genomic context
Jiaojiao Guan, Yongxin Ji, Cheng Peng +4
Bacteriophages are viruses that target bacteria, playing a crucial role in microbial ecology. Phage proteins are important in understanding phage biology, such as virus infection,…
q-bio.GN2024
Accurate and efficient protein embedding using multi-teacher distillation learning
Jiayu Shang, Cheng Peng, Yongxin Ji +4
Motivation: Protein embedding, which represents proteins as numerical vectors, is a crucial step in various learning-based protein annotation/classification problems, including gen…