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20232026
most citedBenchmarking Large Language Models on Multiple Tasks in Bioinformatics NLP with Prompting

1 citations · 2 across the 14 of their papers we have counts for

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cs.CL2026

Compile, Don't Memorize: A Context Compilation Architecture (CCA) for In-Context Learning

Jinhu Qi, Minda Hu, Wentao Zhang +4

Large language models (LLMs) increasingly handle in-context learning (ICL) tasks where a long, novel context defines the rules, knowledge, and output schema for a series of questio…

cs.CL2026

TREK: A Travel Reasoning and Evaluation Kit for LLM Agents in Complex Trip Planning

Jinhu Qi, Wentao Zhang, Siu Man Ng +4

Travel planning is a demanding stress test for tool-using LLM agents: a usable itinerary is a single artifact that must be right along many axes at once - every flight, hotel, and…

cs.CL2026

Reinforcement Learning for Large Language Model Selective Evidence Adoption from Contaminated Retrieval Results

Yanyu Chen, Yue Li, Yongyi Cui +2

Retrieval-augmented large language models frequently face contexts that interleave useful evidence with misleading statements or instruction-like content. Blanket refusal discards…

cs.CL2026

GUI-CIDER: Mid-training GUI Agents via Causal Internalization and Density-aware Exemplar Reselection

Zheng Wu, Chengcheng Han, Zhengxi Lu +5

Despite the rapid progress of multimodal large language models in building Graphical User Interface (GUI) agents, their real-world task completion is fundamentally bottlenecked by…

cs.CL2026

A Principle-Driven Adaptive Policy for Group Cognitive Stimulation Dialogue for Elderly with Cognitive Impairment

Jiyue Jiang, Yanyu Chen, Pengan Chen +7

Cognitive impairment is becoming a major public health challenge. Cognitive Stimulation Therapy (CST) is an effective intervention for cognitive impairment, but traditional methods…

cs.CL2026

TRACE: Trajectory-Aware Comprehensive Evaluation for Deep Research Agents

Yanyu Chen, Jiyue Jiang, Jiahong Liu +3

The evaluation of Deep Research Agents is a critical challenge, as conventional outcome-based metrics fail to capture the nuances of their complex reasoning. Current evaluation fac…

cs.CL2026

Query-focused and Memory-aware Reranker for Long Context Processing

Yuqing Li, Jiangnan Li, Mo Yu +5

Built upon the existing analysis of retrieval heads in large language models, we propose an alternative reranking framework that trains models to estimate passage-query relevance u…

cs.CL2025

DS-ProGen: A Dual-Structure Deep Language Model for Functional Protein Design

Yanting Li, Jiyue Jiang, Zikang Wang +11

Inverse Protein Folding (IPF) is a critical subtask in the field of protein design, aiming to engineer amino acid sequences capable of folding correctly into a specified three-dime…

cs.CL2025★ 1 cited

Benchmarking Large Language Models on Multiple Tasks in Bioinformatics NLP with Prompting

Jiyue Jiang, Pengan Chen, Jiuming Wang +13

Large language models (LLMs) have become important tools in solving biological problems, offering improvements in accuracy and adaptability over conventional methods. Several bench…

cs.CL2025

Developing and Utilizing a Large-Scale Cantonese Dataset for Multi-Tasking in Large Language Models

Jiyue Jiang, Alfred Kar Yin Truong, Yanyu Chen +7

High-quality data resources play a crucial role in learning large language models (LLMs), particularly for low-resource languages like Cantonese. Despite having more than 85 millio…